RRC ID 70916
Author Lee JH, Jung JH, Kim MK, Choe HN, Lim S.
Title Hymenobacter taeanensis sp. nov., radiation resistant bacterium isolated from coastal sand dune.
Journal Antonie Van Leeuwenhoek
Abstract An aerobic, Gram-stain-negative, non-motile, non-spore-forming, rod-shaped, and light pink-colored bacterial strain, designated TS19T, was isolated from a sand sample obtained from a coastal sand dune after exposure to 3 kGy of gamma radiation. Phylogenetic analysis based on the 16S rRNA gene sequences revealed that the isolate was a member of the genus Hymenobacter and was most closely related to H. wooponensis WM78T (98.3% similarity). Strain TS19T and H. wooponensis showed resistance to gamma radiation with D10 values (i.e., the dose required to reduce the bacterial population by tenfold) of 7.3 kGy and 3.5 kGy, respectively. The genome of strain TS19T consists of one contig with 4,879,662 bp and has a G + C content of 56.2%. The genome contains 3,955 protein coding sequences, 44 tRNAs, and 12 rRNAs. The predominant fatty acids of strain TS19T were iso-C15:0, summed feature 4 (iso-C17:1 I and/or anteiso-C17:1 B), summed feature 3 (C16:1 ω6c and/or C16:1 ω7c), and C16:1 ω5c. The major polar lipids were phosphatidylethanolamine, and one unidentified aminophospholipid. The main respiratory quinone was menaquinone-7. Based on the phylogenetic, physiological, and chemotaxonomic characteristics, strain TS19T represents a novel species, for which the name Hymenobacter taeanensis sp. nov. is proposed. The type strain is TS19T (= KCTC 72897T = JCM 34023T).
Volume 114(10)
Pages 1585-1593
Published 2021-10-1
DOI 10.1007/s10482-021-01624-5
PII 10.1007/s10482-021-01624-5
PMID 34292424
MeSH Bacterial Typing Techniques Cytophagaceae* / genetics DNA, Bacterial / genetics Fatty Acids / analysis Phylogeny RNA, Ribosomal, 16S / genetics Sand* Sequence Analysis, DNA Vitamin K 2
Resource
General Microbes JCM34023