RRC ID 70976
Author Romanenko LA, Kurilenko VV, Chernysheva NY, Tekutyeva LA, Velansky PV, Svetashev VI, Isaeva MP.
Title Harenicola maris gen. nov., sp. nov. isolated from the Sea of Japan shallow sediments.
Journal Arch Microbiol
Abstract A Gram-negative, non-motile bacterium КMM 3653T was isolated from a sediment sample from the Sea of Japan seashore, Russia. On the basis of the 16S rRNA gene sequence analysis the strain КMM 3653T was positioned within the family Rhodobacteraceae (class Alphaproteobacteria) forming a distinct lineage with the highest gene sequence similarities to the members of the genera Pacificibacter (95.2-94.7%) and Nioella (95.1-94.5%), respectively. According to the phylogenomic tree based on 400 conserved protein sequences, strain КMM 3653T was placed in the cluster comprising Vannielia litorea, Nioella nitratireducens, Litoreibacter albidus and Pseudoruegeria aquimaris as a separate lineage adjacent to V. litorea KCTC 32083T. The average nucleotide identity values between strain КMM 3653T and V. litorea KCTC 32083T, N. nitratireducens KCTC 32417T, L. albidus KMM 3851T, and P. aquimaris CECT 7680T were 71.1, 70.3, 69.6, and 71.0%, respectively. Strain КMM 3653T contained Q-10 as the predominant ubiquinone and C18:1ω7c as the major fatty acid followed by C16:0. The polar lipids were phosphatidylcholine, phosphatidylglycerol, diphosphatidylglycerol, an unidentified phospholipid, two unidentified aminolipids, and five unidentified lipids. The DNA G+C content of 61.8% was calculated from the genome sequence. Based on the phylogenetic evidence and distinctive phenotypic characteristics, we proposed strain KMM 3653T (= KCTC 82575T) to be classified as a novel genus and species Harenicola maris gen. nov., sp. nov.
Volume 203(7)
Pages 3973-3979
Published 2021-9-1
DOI 10.1007/s00203-021-02360-0
PII 10.1007/s00203-021-02360-0
PMID 34036410
MeSH Geologic Sediments* / microbiology Oceans and Seas Phospholipids / analysis Phylogeny RNA, Ribosomal, 16S / genetics Rhodobacteraceae* / classification Rhodobacteraceae* / genetics Russia Species Specificity
Resource
General Microbes JCM31805 JCM30752