RRC ID 70984
Author Qu PH, Luo HM, Feng JH, Li S, Chen C, Dong L, Ming YZ, Li WJ, Lin Y.
Title Sandaracinobacteroides hominis gen. nov., sp. nov., isolated from human skin.
Journal Arch Microbiol
Abstract Strain SZY PN-1 T, representing a novel Gram-negative, aerobic, non-motile, rod-shaped and yellow-pigmented bacterium, was isolated from a skin sample of a healthy Chinese male. Growth occurred at pH 6.0-8.0 (optimum, pH 7.0) and 10-37 ℃ (optimum, 30 ℃) with 0-1.0% (w/v) NaCl in R2A agar. Comparative analysis of the 16S rRNA gene sequences revealed that strain SZY PN-1 T shared high similarities with two invalid-published species, "Sandaracinobacter sibiricus" RB16-17 (97.1%) and "Sandaracinobacter neustonicus" JCM 30734 (96.6%), respectively. Phylogenetic analysis of 16S rRNA gene sequences together with protein-concatemer tree showed that SZY PN-1 T formed a separate branch within the family Sphingosinicellaceae. The DNA G + C content of the strain SZY PN-1 T was 65.0% (genome). The polar lipid profile included phosphatidylethanolamine, phosphatidylglycerol, two sphingoglycolipids, diphosphatidylglycerol, five unidentified glycolipids, and seven unidentified lipids. The predominant fatty acids (> 10.0%) were identified as C18:1 ω7c and/or C18:1 ω6c, C17:1 ω6c, C16:1 ω7c and/or C16:1 ω6c. The major respiratory quinone was Q-10. Based on the phenotypic and genotypic features, a novel genus and species, Sandaracinobacteroides hominis gen. nov., sp. nov. is proposed, with type strain SZY PN-1 T (= KCTC 82150 T = NBRC 114675 T).
Volume 203(8)
Pages 5067-5074
Published 2021-10-1
DOI 10.1007/s00203-021-02454-9
PII 10.1007/s00203-021-02454-9
PMID 34302507
MeSH Bacterial Typing Techniques Base Composition DNA, Bacterial / genetics Fatty Acids* Humans Phospholipids* / analysis Phylogeny RNA, Ribosomal, 16S / genetics Sequence Analysis, DNA Ubiquinone
Resource
General Microbes JCM30734