論文 - 詳細
| RRC ID | 70991 |
|---|---|
| 著者 | Saticioglu IB. |
| タイトル | Flavobacterium erciyesense sp. nov., a putative non-pathogenic fish symbiont. |
| ジャーナル | Arch Microbiol |
| Abstract |
During a study aiming at isolation and genomic characterization of non-pathogenic fish symbionts, strain F-328T was isolated from skin mucus of healthy-seeming rainbow trout (Oncorhynchus mykiss) and subjected to polyphasic characterization, including a comprehensive genome analysis. Strain F-328T was Gram stain negative, none-gliding, strictly aerobic, and rod shaped. The 16S rRNA gene sequence of strain F-328T exhibited the highest level of identity (98.9%) with F. turcicum F-339T. The major fatty acids were iso-C15:0, C15:1 ω6c, and summed feature 3 (C16:1 ω7c, C16:1 ω6c). The polar lipid profile consisted mainly of phosphatidylethanolamine and aminolipids, while the predominant menaquinone was MK-6. The DNA G + C content and genome size of the strain were 35.3% and 3.4 Mb, respectively. Strain F-328T shows 93.8% average nucleotide identity and 53% digital DNA-DNA hybridization identity with the closest type strain F. turcicum F-339T. In addition, strain F-328T was found to carry antimicrobial resistance genes, which confer resistance to several antimicrobials, including aminoglycoside, macrolides, and streptogramin. Differential phenotypic properties, together with the phylogenetic inference, demonstrate that strain F-328T should be classified as a novel species of the genus Flavobacterium for which the name Flavobacterium erciyesense sp. nov. is proposed, with F-328T as the type strain (= JCM 34201T = KCTC 82261T). |
| 巻・号 | 203(9) |
| ページ | 5783-5792 |
| 公開日 | 2021-11-1 |
| DOI | 10.1007/s00203-021-02566-2 |
| PII | 10.1007/s00203-021-02566-2 |
| PMID | 34515811 |
| MeSH | Animals Bacterial Typing Techniques Base Composition DNA, Bacterial / genetics Fatty Acids* / analysis Flavobacterium* / genetics Phylogeny RNA, Ribosomal, 16S / genetics Sequence Analysis, DNA Vitamin K 2 |
| オルトメトリクス指標 |
オルトメトリクス指標項目
|
| 最多言及媒体 | X(Twitter) |
| 各媒体での言及数の合計 | 2 |
| 過去6か月間でのオルトメトリクス指標の変動値 | 0.0 |
| リソース情報 | |
| 一般微生物 | JCM34201 |