RRC ID 70996
Author Jang JH, Maeng SH, Jung HY, Kim MK, Subramani G.
Title Hymenobacter radiodurans sp. nov., isolated from soil in the Republic of Korea.
Journal Arch Microbiol
Abstract A bacterial strain, designated 17J36-26T, was isolated from the UV-irradiated soil from Jeju Island, South Korea. Cells are Gram negative, strictly aerobic, non-motile, non-spore forming, rod shaped, and catalase and oxidase positive. The major fatty acids of strain 17J36-26T were summed feature 4 (17:1 iso I/17:1 anteiso B), summed feature 3 (16:1 ω6c/16:1 ω7c), C16:1 ω5c and iso-C15:0. The polar lipid profile contained phosphatidylethanolamine, unidentified aminophospholipid, phospholipids and four unidentified lipids. The G+C content of the strain 17J36-26T was 62.6 mol%. The 16S rRNA gene sequence analysis showed that strain 17J36-26T was phylogenetically related to Hymenobacter qilianensis DK6-37T and Hymenobacter roseosalivarius AA718T (97.5% and 96.8% sequence similarity, respectively). Strain 17J36-26T showed resistance to UV radiation. Both average nucleotide identity (ANI) and in silico DNA-DNA hybridization (isDDH) values between strains 17J36-26T and type strains of Hymenobacter species were lower than the cut-off (≥ 95-96% for ANI and ≥ 70% for isDDH) to define a bacterial new species. The polyphasic approach using genotypic, phenotypic and chemotaxonomic data showed that strain 17J36-26T could be distinguished from its phylogenetically related species, and thus, the strain representative of a novel species within the genus Hymenobacter, for which the name Hymenobacter radiodurans sp. nov. (type strain 17J36-26T = KCTC 62269T = JCM 33185T) is proposed.
Volume 203(2)
Pages 655-661
Published 2021-3-1
DOI 10.1007/s00203-020-01895-y
PII 10.1007/s00203-020-01895-y
PMID 33026471
MeSH Bacteroidetes / classification Bacteroidetes / genetics Base Composition Cytophagaceae / chemistry Cytophagaceae / classification* Cytophagaceae / genetics Cytophagaceae / radiation effects Fatty Acids / analysis Phospholipids / analysis Phylogeny RNA, Ribosomal, 16S / genetics Republic of Korea Soil Microbiology* Species Specificity Ultraviolet Rays
Resource
General Microbes JCM33185 JCM19763