RRC ID 71178
著者 Yu B, Han C, Zhao J, Zhang Y, Shan Q, Wu Y, Ju H, Xiang W, Wang X.
タイトル Streptacidiphilus fuscans sp. nov., a novel actinobacterium isolated from the root of pumpkin (Cucurbita moschata).
ジャーナル Int J Syst Evol Microbiol
Abstract A novel acidophilic actinobacterium, designated strain NEAU-YB345T, was isolated from a pumpkin root collected from Mudanjiang, Heilongjiang Province, northeast PR China. Based on 16S rRNA gene sequence similarity and chemotaxonomic and morphological properties, the isolate was assigned to the genus Streptacidiphilus, with the high 16S rRNA gene sequence similarities to Streptacidiphilus melanogenes JCM 16224T (99.2 %), Streptacidiphilus anmyonensis JCM 16223T (99.1 %) and Streptacidiphilus jiangxiensis JCM 12277T (98.7 %). Its cell wall contained ll-diaminopimelic acid as the major diamino acid. Rhamnose, ribose, glucose and galactose were the detected sugars from the whole-cell hydrolysates. The phospholipid profile consisted of diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylinositol, phosphatidylinositol mannoside and an unidentified phospholipid. The menaquinones were MK-9(H8) and MK-9(H6). Major fatty acids were C16 : 0, iso-C16 : 0, iso-C15 : 0 and anteiso-C15 : 0. Phylogenetic analysis using 16S rRNA gene and whole-genome sequences placed the strain in distinct clades but within the genus Streptacidiphilus. The DNA G+C content was 71.2 mol%. Based on DNA-DNA relatedness and physiological and biochemical data, the isolate could be distinguished from its closest relatives. Therefore, strain NEAU-YB345T represents a novel species of the genus Streptacidiphilus, for which the name Streptacidiphilus fuscans sp. nov. is proposed. The type strain is NEAU-YB345T (=CCTCC AA 2020030T=JCM 33976T).
巻・号 71(6)
公開日 2021-6-1
DOI 10.1099/ijsem.0.004824
PMID 34106822
MeSH Actinobacteria / genetics Actinobacteria / growth & development Actinobacteria / isolation & purification* Actinobacteria / ultrastructure Base Sequence Cucurbita / microbiology* DNA, Bacterial / genetics Genome, Bacterial Phylogeny Plant Roots / microbiology* RNA, Ribosomal, 16S / genetics Sequence Analysis, DNA Species Specificity
リソース情報
一般微生物 JCM33976 JCM16224 JCM16223 JCM12277