RRC ID 73198
著者 Elliott TL, Zedek F, Barrett RL, Bruhl JJ, Escudero M, Hroudová Z, Joly S, Larridon I, Luceño M, Márquez-Corro JI, Martín-Bravo S, Muasya AM, Šmarda P, Thomas WW, Wilson KL, Bureš P.
タイトル Chromosome size matters: genome evolution in the cyperid clade.
ジャーナル Ann Bot
Abstract BACKGROUND AND AIMS:While variation in genome size and chromosome numbers and their consequences are often investigated in plants, the biological relevance of variation in chromosome size remains poorly known. Here, we examine genome and mean chromosome size in the cyperid clade (families Cyperaceae, Juncaceae, Thurniaceae), which is the largest vascular plant lineage with predominantly holocentric chromosomes.
METHODS:We measured genome size in 436 species of cyprids using flow cytometry and augment this data with previously published datasets. We then separately compared genome and mean chromosome sizes (2C/2n) amongst the major lineages of cyperids and analyzed how these two genomic traits are associated with various environmental factors using phylogenetically-informed methods.
KEY RESULTS:We show that cyperids have the smallest mean chromosome sizes recorded in seed plants, with a large divergence between the smallest and largest values. We found that cyperid species with smaller chromosomes have larger geographical distributions and that there is a strong inverse association between mean chromosome size and number across this lineage.
CONCLUSIONS:The distinct patterns in genome size and mean chromosome size across the cyperids might be explained by holokinetic drive. The numerous small chromosomes might function to increase genetic diversity in this lineage where crossovers are limited during meiosis.
公開日 2022-11-7
DOI 10.1093/aob/mcac136
PII 6808968
PMID 36342743
PMC PMC9851305
MeSH Chromosomes, Plant* / genetics Evolution, Molecular* Genome Size Genome, Plant / genetics Phylogeny
IF 4.005
リソース情報
GBIF Plant specimens of Ishikawa Museum of Natural History Plant Specimens of The Cattle Museum Long-term fauna and flora records of the experimental forests of the Forest Research Station of Hokkaido University, Japan Plant specimens of Toyota City Nature Sanctuary Plant specimens of Tochigi Prefectural Museum Plant specimens of Nasunogahara Museum Spermatophyta Specimens of Kawasaki Municipal Science Museum Plant specimens of Otaru Museum Plant specimens of Komatsu City Museum Plant specimens of Horaiji-san Museum of Natural History Toji K. collection The 6-7th National Survey on the Natural Environment: Vegetation Survey Vascular Plant Specimens of Yamagata Prefectural Museum Nagoya-Plants Vascular plant specimens of Omachi Alpine Museum Plant Specimens collections of the Kyushu University Museum Vascular plant specimens of Akita Prefectural Museum Vascular plants database of Atsugi City Museum Herbarium, University Archives and Collections, Fukushima University, Japan (FKSE) Angiospermatatophytina Collection of Saitama Museum of Natural History Vascular plant specimens of Iida City Museum Plant specimens of Oiso Municipal Museum Herbarium of Hokkaido University Museum (SAPS) Vascular Plant Collection of Natural History Museum and Institute, Chiba Vascular plants collection of Hiratsuka City Museum Herbarium Specimens of Museum of Nature and Human Activities, Hyogo Pref., Japan Plant specimens of Kushiro City Museum Spermatophyta collection of Museum of Natural and Environmental History, Shizuoka Monitoring records of plant species in the Hakone region of Fuji-Hakone-Izu National Park, Japan, 2001-2010 Ibaraki Nature Museum, Vascular Plants collection Plant specimens of Horaiji-san Museum of Natural History Kichi T. collection Vascular plant specimens of National Museum of Nature and Science (TNS) Spermatophytes collection of Okinawa Prefectural Museum & Art Museum Plant specimens of Bihoro Museum Herbarium Specimens of Bonin and Ryukyu Islands Vascular plant specimens of Sugadaira Research Station, Mountain Science Center, University of Tsukuba Herbarium of Shinshu University Plant specimens of Parthenon Tama Museum (PTHM) Plant specimens of Obihiro Centennial City Museum Vascular plant specimens of Nagano Environmental Conservation Research Institute, Nagano Prefecture Plant Observation Records of Japan Botanical Specimens of Kaizuka City Museum of Natural History (KCMN) Tracheophyta collection of Biodiversity Center of Japan, Ministry of the Environment Vascular plant specimens of The Shirakami Research Center for Environmental Sciences, Hirosaki University Vascular plant specimens of Aomori City Forestry Museum Asahikawa Educational College herbarium Plant specimens of the Museum of Yamagata University Plant specimens of Toyota City Nature Sanctuary (from non-museum circle) Vascular plant specimens of Toyama Science Museum Plant specimens of Takatsuki Nature Museum (Aquapia Akutagawa) The 2-5th National Survey on the Natural Environment: Vegetation Survey Plant Specimens of Kurashiki Museum of Natural History Herbarium Specimens of Tokushima Prefectural Museum, Japan Herbarium of Kitakyushu Museum of Natural History and Human History Plant Specimens of Lake Biwa Museum Spermatophyta specimens of Iwate Prefectural Museum Vascular Plants Collection of Sagamihara City Museum Plant specimens in the Museum of Nature and Human Activities, Hyogo Prefecture, Japan Plant specimens deposited in Osaka Museum of Natural History, Japan Vascular Plant Specimens of Kochi Prefectural Makino Botanical Garden Plant Specimens of The Shimane Nature Museum of Mt. Sanbe Plant specimens of Kiritappu Wetland Center Vascular Plant Specimen database of Kanagawa Prefectural Museum of Natural History Gunma Museum of Natural History, Vascular Plant Specimen