RRC ID 73211
著者 David KT.
タイトル Global gradients in the distribution of animal polyploids.
ジャーナル Proc Natl Acad Sci U S A
Abstract Whole genome duplications (WGDs) are one of the most dramatic mutations that can be found in nature. The effects of WGD vary dramatically but can have profound impacts on an organism's expression, cytotype, and phenotype, altering their evolutionary trajectory as a result. Despite the growing appreciation for the contribution of WGDs in animal evolution, the significant factors influencing how polyploid animal lineages are established and maintained are still not well understood. Many hypotheses have been proposed which predict how climate and environment may influence polyploid incidence and evolution. To test and distinguish between these hypotheses, I assembled a global dataset of polyploid occurrences in three animal clades (Amphibia, Actinopterygii, and Insecta). The dataset encompasses chromosomal, phylogenetic, environmental, and climatic data across 57,905 species in 2,223 terrestrial, freshwater, and marine ecoregions. My analysis reveals a strong latitudinal gradient in all three clades, with the tendency for polyploid taxa to occur more frequently at higher latitudes. Many variables were significant (phylogenetic ANOVA P < 0.05 after Bonferroni correction) between polyploids and diploids across taxa, notably those pertaining to temperature dynamics and glaciation. Glaciation in particular appears to be the most significant driver of polyploidy in animals, as these models had the highest relative likelihoods consistently across clades. These results contribute to a model of evolution wherein the broader genomic toolkit of polyploids facilitates adaptation and ecological resilience, enabling polyploids to colonize new or rapidly changing environments.
巻・号 119(48)
ページ e2214070119
公開日 2022-11-21
DOI 10.1073/pnas.2214070119
PMID 36409908
PMC PMC9860298
MeSH Adaptation, Physiological Animals Diploidy* Insecta Phylogeny Polyploidy*
IF 9.412
リソース情報
GBIF Ibaraki Nature Museum, Fish collection Ibaraki Nature Museum, Amphibians and Reptiles collection Fish collection of the Museum of Nature and Human Activities, Hyogo Fish Collection of Yokosuka City Museum Fish Collection of Hokkaido University Insect specimens of Kashihara City Museum of Insect Insect specimens of Omogo Mountain Museum Fish Specimens of Graduate School of Bioresources Mie University Fish specimen database of Osaka Museum of Natural History Hymenopteran specimen database of Osaka Museum of Natural History Fish collection of National Museum of Nature and Science Fish Collection of Natural History Museum and Institute, Chiba Coleoptera specimen database of Osaka Museum of Natural History Lepidoptera specimen database of Osaka Museum of Natural History Insects specimen database of Osaka Museum of Natural History Butterfly Specimens of Yamaguchi Prefectural Yamaguchi Museum Arthropoda (excepting insect) collection of Osaka Museum of Natural History Chironomid Specimen records in the Chironomid DNA Barcode Database. Amphibian specimens of Toyama Science Museum Insect Specimens of Ibaraki University (Faculty of Science) Insect specimens of Himeji City Science Museum Insect collection of Itami City Museum of Insects Long-term fauna and flora records of the experimental forests of the Forest Research Station of Hokkaido University, Japan Insect specimens of Otaru Museum Zoological specimens of Gifu Prefectural Museum Insect specimens of Kaizuka City Museum of Natural History Insecta specimens of Okutama Visitor Center, Tokyo Insect specimens of Rikuzen-Takata City Museum Insect specimens of Iwate Prefectural Museum Underwater video and still-image dataset of fishes and other aquatic animals in Lake Biwa, Japan, observed via carp-mounted video loggers. Insecta Specimens of Kawasaki Municipal Science Museum Insect specimens of Toyota City Nature Sanctuary Asia-Pacific Dataset Insect Specimens of Kitami Region Museum of Science History and Art Ogasawara DNA barcode database Amphibian specimens of Obihiro Centennial City Museum Insect specimens of Obihiro Centennial City Museum Marine Biological Sample Database, JAMSTEC Project for Reef Fish Monitoring Specimen based records and geographic locations of carabid beetles (Coleoptera) collected mainly by Dr. Kazuo Tanaka Insect specimens of Yonezawa Insectarium Bee occurrence data collected in "Hanamaru-Maruhana national census (Bumble bee national census)" in Japan Entomological Specimens of Museum of Nature and Human Activities, Hyogo Pref., Japan Insect specimens of Sagamihara City Museum Lepidoptera collection of National Museum of Nature and Science Species list recorded by baited cameras at deep sea area in Japan Fish specimens of Natural History Museum, Kishiwada City Insect specimens of Kushiro City Museum Insect specimens of Ryukyu University Museum (Fujukan) Marine Invertebrata specimen database of Osaka Museum of Natutal History Fish monitoring data in Lake Kasumigaura Orthoptera collection of Hiratsuka City Museum Odonata Specimens of Yamaguchi prefectural Yamaguchi Museum Gunma Museum of Natural History, Insect Specimen Gunma Museum of Natural History, Fish Specimen Lepidoptera specimen database of Japan Akita Prefectural Museum, Insect Collection Insect Specimens Deposited in Saga Prefectural Space and Science Museum, JAPAN Gunma Museum of Natural History, Amphibia and Reptile Specimen Insect Collection of Yokosuka City Museum Echigo-Matsunoyama Museum of Natural Science, Usuke Shiga butterfly collection Plankton&BenthosResearch Insect specimens of Oiso Municipal Museum Fish collection of the Kagoshima University Museum Actinopterygius Specimens of Akita Prefectural Museum Amphibians Specimens of Akita Prefectural Museum Insect Collection of Saitama Museum of Natural History Observation records of Amphibians Insect Collection of Natural History Museum and Institute, Chiba Ibaraki Nature Museum, Arthropoda collection Insecta collection of Museum of Natural and Environmental History, Shizuoka Acoustic monitoring data of anuran species inside and outside the evacuation zone of the Fukushima Daiichi power plant accident Coleoptera Specimens of Yamaguchi prefectural Yamaguchi Museum Odonata collection of National Museum of Nature and Science Lepidopterous specimens of Yamagata Prefectural Museum Mollusca specimens of Manazuru Shell Museum Fish Collection of Coastal Branch of Natural History Museum and Institute, Chiba Insect specimens of Tokushima Prefectural Museum Insect specimens of Hokkaido University Hymenoptera collection of National Museum of Nature and Science A crowdsourcing approach to collecting photo-based insect and plant observation records Fish specimens of Ryukyu University Museum (Fujukan) Hokkaido University Coleoptera Collection NIAES Coleoptera Specimen Database Specimen-based records of geometrid, pyralid, and crambid moths (Lepidoptera) with location information from the collection of Dr. Hiroshi Inoue Fish specimens of Toyama Science Museum Hymenoptera Specimens of Yamaguchi prefectural Yamaguchi Museum Diptera Specimens of Yamaguchi prefectural Yamaguchi Museum JODC Dataset Ground Beetle of Japan Specimen Database Insect specimens of Komatsu City Museum Insect specimens of Toyama Science Museum Image dataset of ophiuroid and other deep sea benthic organisms in 2015 extracted from the survey off Sanriku, Japan, by the research following the Great East Japan Earthquake 2011