RRC ID 75174
著者 Pan H, Zhou ZQ, He GW, Zhou J, Jin K, Liu HH, Wang C, Yang H, Yu YB, Tian Y.
タイトル Neorhizobium xiangyangii sp. nov., isolated from a highland barley cultivation soil in Qamdo, Tibet.
ジャーナル Arch Microbiol
Abstract A novel Gram-negative, aerobic, rod-shaped and non-nitrogen fixing bacterium named T786T was isolated from a highland barley cultivation soil in Qamdo, Tibet Autonomous Region, PR China. Strain T786T grew at 5-30 ℃ and pH 6.0-10.0 (optimum, 20-25 ℃ and pH 7.0-8.0) with 0-4% (w/v) NaCl (optimum, 0%). The 16S rRNA gene sequences of strain T786T showed the highest similarity to Neorhizobium vignae CCBAU 05176T (98.7%), followed by Neorhizobium alkalisoli CCBAU 01393T (98.5%), Neorhizobium tomejilense T17_20T (98.4%), Neorhizobium huautlense S02T (98.4%), and Neorhizobium galegae ATCC 43677T (98.0%). Phylogenetic analysis based on 16S rRNA genes indicated that strain T786T was a new member of the genus Neorhizobium. The digital DNA-DNA hybridization and average nucleotide identity values between strain T786T and related strains were estimated as 20.2-20.6% and 76.6-80.0%, respectively. The genomic DNA G + C content based on the draft genome sequence was 60.2%. The major cellular fatty acids were Summed feature 8 (C18:1 ω7c or C18:1 ω6c), C16:0 and Summed feature 3 (C16:1 ω7c or C16:1 ω6c). The polar lipids were diphosphatidyl glycerol, phosphatidyl glycerol, phosphatidyl ethanolamine, phosphatidyl methyl ethanolamine, unidentified phospholipid and unidentified lipids (1-4). The isoprenoid quinone was ubiquinone-10. The DAP and sugar components of cell wall were meso-DAP and ribose, glucose, respectively. Based on phenotypic, phylogenetic, and genotypic data, for which the name Neorhizobium xiangyangii sp. nov. is proposed. The type strain is T786T (= JCM 35100T = CICC 25102T).
巻・号 204(6)
ページ 345
公開日 2022-5-23
DOI 10.1007/s00203-022-02961-3
PII 10.1007/s00203-022-02961-3
PMID 35604458
MeSH Bacterial Typing Techniques DNA, Bacterial / genetics Ethanolamines Fatty Acids / analysis Hordeum* Phosphatidylglycerols / analysis Phospholipids / analysis Phylogeny RNA, Ribosomal, 16S / genetics Rhizobiaceae* Sequence Analysis, DNA Soil Soil Microbiology Tibet
リソース情報
一般微生物 JCM 35100