論文 - 詳細
| RRC ID | 75177 |
|---|---|
| 著者 | Chen MQ, Tian Y, Zhang C, Zhou JS, Tashi L, Wang WL, Pan H. |
| タイトル | Deefgea salmonis sp. nov., isolated from gills of rainbow trout (Oncorhynchus mykiss). |
| ジャーナル | Arch Microbiol |
| Abstract |
A Gram-stain-negative, milky white, aerobic, rod-shaped bacterium named strain H3-26T was isolated from gills of Oncorhynchus mykiss in Lhasa, Tibet Autonomous Region, PR China. Strain H3-26T grew at 4-30 °C and pH 5.0-11.0 (optimum, 25 °C and pH 7.0) with 0-1% (w/v) NaCl (optimum, 0%). The 16S rRNA gene sequence of strain H3-26T showed the highest similarity to Deefgea rivuli WB 3.4-79T (98.42%), followed by Deefgea chitinilytica Nsw-4T (96.91%). Phylogenetic analysis based on 16S rRNA genes indicated that strain H3-26T was a new member of the genus Deefgea. The digital DNA-DNA hybridization and average nucleotide identity values between the genome sequence of strain H3-26T and Deefgea spp. were 21.2-21.9% and 76.3-77.4%, respectively. The genomic DNA G+C content of strain H3-26T was 48.74%. The predominant fatty acids were C12:0, C14:0, C16:0 and C16:1 ω7c. Based on phenotypic, phylogenetic, and genotypic data, strain H3-26T is considered to represent a novel species of the genus Deefgea, for which the name Deefgea salmonis sp. nov. is proposed. The type strain is H3-26T (= JCM 35050T = CICC 25103T). |
| 巻・号 | 204(7) |
| ページ | 366 |
| 公開日 | 2022-6-4 |
| DOI | 10.1007/s00203-022-02980-0 |
| PII | 10.1007/s00203-022-02980-0 |
| PMID | 35661276 |
| MeSH | Animals Bacterial Typing Techniques DNA, Bacterial / genetics Fatty Acids / analysis Gills Oncorhynchus mykiss* / genetics Phospholipids / chemistry Phylogeny RNA, Ribosomal, 16S / genetics Sequence Analysis, DNA |
| オルトメトリクス指標 |
オルトメトリクス指標項目
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| 最多言及媒体 | Blogs |
| 各媒体での言及数の合計 | 1 |
| 過去6か月間でのオルトメトリクス指標の変動値 | 0.0 |
| リソース情報 | |
| 一般微生物 | JCM 35050 |