Reference - Detail
| RRC ID | 75195 |
|---|---|
| Author | Tuikhar N, Kirdat K, Nair G, Padma S, Thorat V, Swetha P, Sathe S, Sundararaj R, Yadav A. |
| Title | Rothia santali sp. nov., endophytic bacteria isolated from sandalwood (Santalum album L.) seedling. |
| Journal | Arch Microbiol |
| Abstract |
A novel, mustard yellow-pigmented aerobic bacterial strain designated AR01T was isolated from hypocotyl tissue of a sandalwood seedling from Bangalore, India. The 16S rRNA gene of strain AR01T had the highest 98.97% sequence similarity with Rothia halotolerans YIM 90716T (KCTC 19172) followed by Rothia kristinae PM 129T (NBRC 15354T) (97.31%) and Rothia koreensis P31T (JCM 15915) (97.11%), respectively. The strain AR01T was coccoid-shaped, non-motile, non-spore forming, oxidase negative and catalase positive. The strain AR01T has a genome size of 3.31 Mb containing 2993 protein-coding genes including 48 tRNA and 10 rRNAs spread across 84 contigs. The genomic DNA G + C content was 71.77 mol%. The calculated dDDH was 31.10% and the OrthoANI value was 85.27% when compared with its closest related type strain Rothia halotolerans YIM 90716T. The predominant cellular fatty acids were C16:0 iso, C15:0 anteiso and C17:0 anteiso. The strain AR01T contains major polar lipids including diphosphatidylglycerol and phosphatidylglycerol. The distinct physiological, biochemical characteristics and genotypic relatedness indicated that AR01T represents a novel species of the genus Rothia, for which the name Rothia santali sp. nov. (Type strain AR01T = MCC 4800T = JCM 35593T) is proposed. |
| Volume | 204(10) |
| Pages | 609 |
| Published | 2022-9-9 |
| DOI | 10.1007/s00203-022-03237-6 |
| PII | 10.1007/s00203-022-03237-6 |
| PMID | 36085195 |
| MeSH | Bacteria India Micrococcaceae Oils, Volatile* RNA, Ribosomal, 16S / genetics Santalum* / genetics Seedlings Sesquiterpenes* |
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| Total number of mentions | 2 |
| Altmetric score changes over past 6months | 0.0 |
| Resource | |
| General Microbes | JCM 35593 |