論文 - 詳細
| RRC ID | 75206 |
|---|---|
| 著者 | Zhang Y, Liu F, Li FN, Chen MS, Ma X, Zheng ZQ, Tuo L. |
| タイトル | Jiella avicenniae sp. nov., a novel endophytic bacterium isolated from bark of Avicennia marina. |
| ジャーナル | Arch Microbiol |
| Abstract |
A Gram-stain-negative and short rod-shaped strain CBK1P-4T, isolated from surface-sterilized bark of Avicennia marina was investigated by a polyphasic taxonomic approach to resolve its taxonomic position. Strain CBK1P-4T grew at 10-30 °C (optimum, 25 °C), pH 5.0-9.0 (optimum, pH 5.5) and in the presence of 0-9% (w/v) NaCl (optimum, 1-2%). Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain CBK1P-4T belonged to the genus Jiella and was most closely related to species of the genus Jiella (97.4-98.3%). The genome comparisons between strain CBK1P-4T and the closely related species indicated that average nucleotide identity and digital DNA-DNA hybridization values were below the recommended thresholds for assigning strains to the same species (95-96% and 70%, respectively). The cell wall peptidoglycan contained meso-diaminopimelic acid as diagnostic diamino acid. The principal fatty acids were C18:1ω7c and C19:0cycloω8c. The polar lipids were mainly comprised of phosphatidylcholine, diphosphatidylglycerol, phosphatidylglycerol, phosphatidylmonomethylethanolamine, phosphatidylethanolamine, two unidentified aminolipids, one unidentified phospholipid and one unidentified glycolipid. The dominant respiratory quinone was ubiquinone-10. The DNA G + C content of strain CBK1P-4T was 66.7%. Based on the phenotypic features, phylogenetic analysis as well as genome analysis, we conclude that strain CBK1P-4T represents a novel Jiella species, for which the name Jiella avicenniae sp. nov. is proposed. The type strain is CBK1P-4T (= CGMCC 1.18742T = JCM 34330T). |
| 巻・号 | 204(12) |
| ページ | 700 |
| 公開日 | 2022-11-11 |
| DOI | 10.1007/s00203-022-03320-y |
| PII | 10.1007/s00203-022-03320-y |
| PMID | 36367587 |
| MeSH | Alphaproteobacteria* / genetics Avicennia* / genetics Avicennia* / microbiology Bacterial Typing Techniques DNA, Bacterial / genetics Fatty Acids / analysis Phospholipids / analysis Phylogeny Plant Bark / microbiology RNA, Ribosomal, 16S / genetics Sequence Analysis, DNA Ubiquinone / chemistry |
| オルトメトリクス指標 |
オルトメトリクス指標項目
|
| 最多言及媒体 | X(Twitter) |
| 各媒体での言及数の合計 | 2 |
| 過去6か月間でのオルトメトリクス指標の変動値 | 0.0 |
| リソース情報 | |
| 一般微生物 | JCM 34330 JCM 30119 |