RRC ID 75242
著者 Gao ZY, Xue HP, Wang L, Yao Y, Zhang DF, Huang J, Liu C, Zhang AH.
タイトル Sphingopyxis jiangsuensis sp. nov. Isolated From the Surface Water of the Yellow Sea.
ジャーナル Curr Microbiol
Abstract A novel bacterium, designated strain XHP0097T, was isolated from the surface water of the Yellow Sea, China. The cells were Gram-stain-negative, aerobic, rod-shaped, yellow-colored, and non-motile on 2216E agar. Optimal growth of strain XHP0097T occurs at 28 °C and pH 7.0 with the presence of NaCl concentration 2% (w/v). According to the analysis of comparative 16S rRNA gene sequence, strain XHP0097T showed the highest 16S rRNA gene sequence similarity with Sphingopyxis panaciterrulae KCTC 22112T (98.2%). Phylogenetic analysis based on 16S rRNA gene sequences as well as on 120 ubiquitous single-copy protein-coding genes supported that strain XHP0097T formed a distinct phyletic lineage as a new species within the genus Sphingopyxis. Strain XHP0097T showed an average nucleotide identity value and a digital DNA-DNA hybridization (dDDH) of 79.1-81.7% and 21.9-24.4% to the members of the genus Sphingopyxis, respectively. According to genome sequence, the DNA G + C content of XHP0097T was 64.8%. The major fatty acids (>10%) were C16:0 (17.5%), summed feature 3 (C16:1ω7c and/or C16:1ω6c) (15.1%), and summed feature 8 (C18:1ω7c and/or C18:1ω6c) (19.2%). The major polar lipids of strain XHP0097T were phosphatidylcholine (PC), phosphatidylethanolamine (PE), phosphatidylglycerol (PG), diphosphatidylglycerol (DPG), and sphingoglycolipid (SGL). Q-10 was the predominant respiratory quinone. Characteristics of physiological and biochemical, phylogenetic, and chemotaxonomic analysis demonstrated the isolate XHP0097T represents a novel species of the genus Sphingopyxis, for which the name Sphingopyxis jiangsuensis sp. nov. is proposed. The type strain is XHP0097T (=MCCC 1K05845T = GDMCC 1.2415T = JCM 34678T).
巻・号 79(7)
ページ 214
公開日 2022-6-7
DOI 10.1007/s00284-022-02895-5
PII 10.1007/s00284-022-02895-5
PMID 35672580
MeSH Bacterial Typing Techniques DNA, Bacterial / genetics Fatty Acids* / chemistry Phospholipids / chemistry Phylogeny RNA, Ribosomal, 16S / genetics Sequence Analysis, DNA Ubiquinone / chemistry Water*
リソース情報
一般微生物 JCM 34678