RRC ID 75512
Author Takahashi M, Morikawa K, Akao T.
Title Short-length Homologous Region exhaustive Search algorithm (SHRS): A primer design algorithm for differentiating bacteria at the species, subspecies, or strain level based on a whole genome sequence.
Journal J Microbiol Methods
Volume 203
Pages 106605
Published 2022-12-1
DOI 10.1016/j.mimet.2022.106605
PII S0167-7012(22)00200-7
PMID 36341783
MeSH Algorithms Amplified Fragment Length Polymorphism Analysis Bacteria* / genetics Lactobacillus delbrueckii* / genetics Multilocus Sequence Typing / methods
Resource
General Microbes JCM 1002 JCM 11037 JCM 11038 JCM 20398 JCM 20088 JCM 15610 JCM 30917 JCM 1010 JCM 11036 JCM 17838 JCM 20381 JCM 20300 JCM 20061 JCM 20147 JCM 11039