RRC ID 80418
著者 Arafat ST, Hirano S, Sato A, Takeuchi K, Yasuda T, Terahara T, Hamada M, Kobayashi T.
タイトル Sinisalibacter aestuarii sp. nov., isolated from estuarine sediment of the Arakawa River.
ジャーナル Int J Syst Evol Microbiol
Abstract A Gram-stain-negative, rod-shaped, non-motile and strictly aerobic bacterium, which showed biofilm-forming ability on polystyrene, designated as strain B-399T, was isolated from the estuarine sediment of the Arakawa River near Tokyo Bay. It grew at pH 6.0-8.5, at 15-35 °C and in the presence of 0-7.5 % (w/v) NaCl. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain B-399T was clustered in the genus Sinisalibacter and has 96.94 % sequence similarity to Sinisalibacter lacisalsi X12M-4T, which was the only validly described species in this genus. On the basis of our genome sequencing analyses, the average nucleotide identity and digital DNA-DNA hybridization values between strains B-399T and S. lacisalsi X12M-4T were 79.54 and 22.30 %, respectively, which confirms that strain B-399T represents a novel species of the genus Sinisalibacter. The draft genome size and the DNA G+C content of strain B-399T were 4.12 Mb and 65.2 mol%, respectively. The major fatty acids (>10 %) of strain B-399T were C16 : 0, summed feature 8 (C18 : 1 ω6c and/or C18 : 1 ω7c) and C19 : 0 cyclo ω8c. The polar lipids were phosphatidylcholine, phosphatidylglycerol, an unidentified phospholipid, an unidentified aminolipid and unidentified lipids. The respiratory quinone was Q-10. These chemotaxonomic features were almost coincident with those of the genus Sinisalibacter. Therefore, strain B-399T should be classified as representing a new species of the genus Sinisalibacter, for which the name Sinisalibacter aestuarii sp. nov. is proposed. The type strain is B-399T (=NBRC 115629T=DSM 114148T).
巻・号 73(8)
公開日 2023-8-1
DOI 10.1099/ijsem.0.005969
PMID 37578835
MeSH Bacterial Typing Techniques Base Composition DNA, Bacterial / genetics Fatty Acids* / chemistry Phospholipids / chemistry Phylogeny RNA, Ribosomal, 16S / genetics Rivers* / microbiology Sequence Analysis, DNA Ubiquinone / chemistry
リソース情報
一般微生物 JCM 30555