RRC ID 80535
Author Lee B, Kim JA, Han Y, Song JJ, Choi JH, Kang JY.
Title Complete genome sequence of pectin-degrading Flavobacteriaceae bacterium GSB9.
Journal Mar Genomics
Abstract Pectic oligosaccharides, which are considered to be potential prebiotics, may be generated by pectin-degrading enzymes. Here, we report the complete genome sequence of the pectin-degrading marine bacterium, Flavobacteriaceae bacterium GSB9, which was isolated from seawater of South Korea. The complete genome sequence revealed that the chromosome was 3,630,376 bp in size, had a G + C content of 36.6 mol%, and was predicted to encode 3100 protein-coding sequences (CDSs), 40 tRNAs, and six 16S-23S-5S rRNAs. Genome sequence analysis revealed that this strain possesses multiple genes predicted to encode pectin-degrading enzymes. Our analysis may facilitate the future application of this strain against pectin in various industries.
Volume 71
Pages 101047
Published 2023-10-1
DOI 10.1016/j.margen.2023.101047
PII S1874-7787(23)00039-9
PMID 37620053
MeSH Flavobacteriaceae* / genetics Open Reading Frames Pectins* RNA, Ribosomal, 16S Republic of Korea
Resource
General Microbes JCM 34099