RRC ID 84600
著者 Tan S, Zhu LR, Zhang QK, Dong XY, Hou J, Cui HL.
タイトル Genome-based classification of the family Haloferacaceae and description of five novel species of Halobaculum.
ジャーナル Extremophiles
Abstract The taxonomic status of some species of Halobellus, Haloferax, Halogranum, and Haloplanus within the family Haloferacaceae was elucidated by phylogenetic, phylogenomic, and comparative genomic analyses. The relative species of each genus should constitute a single species based on the overall genome-related indexes proposed for species demarcation. The cutoff values of AAI (72.1%), ANI (82.2%), and rpoB' gene similarity (90.7%) were proposed to differentiate genera within the family Haloferacaceae. According to these standards, a novel genus related to the genus Halobaculum was proposed to accommodate Halobaculum halophilum Gai3-2 T and Halobaculum salinum NJ-3-1 T. Five halophilic archaeal strains, DT31T, DT55T, DT92T, SYNS20T, and YSMS11T, isolated from a tidal flat and a marine solar saltern in China, were subjected to polyphasic classification. The phenotypic, phylogenetic, phylogenomic, and comparative genomic analyses revealed that strains DT31T (= CGMCC 1.18923 T = JCM 35417 T), DT55T (= CGMCC 1.19048 T = JCM 36147 T), DT92T (= CGMCC 1.19057 T = JCM 36148 T), SYNS20T (= CGMCC 1.62628 T = JCM 36154 T), and YSMS11T (= CGMCC 1.18927 T = JCM 34912 T) represent five novel species of the genus Halobaculum, for which the names, Halobaculum lipolyticum sp. nov., Halobaculum marinum sp. nov., Halobaculum litoreum sp. nov., Halobaculum halobium sp. nov., and Halobaculum limi sp. nov., are proposed.
巻・号 28(2)
ページ 22
公開日 2024-3-28
DOI 10.1007/s00792-024-01337-3
PII 10.1007/s00792-024-01337-3
PMID 38546878
MeSH China DNA, Archaeal / genetics Euryarchaeota* / genetics Glycolipids Halobacteriaceae* Phylogeny RNA, Ribosomal, 16S / genetics Sequence Analysis, DNA
リソース情報
一般微生物 JCM35417 JCM36147 JCM36148 JCM36154 JCM34912