RRC ID 87090
著者 Li Y, Pootakham W, Ingsriswang S, Dela Cueva F, Cordez BW, Gafforov Y, Unartngam J, Liu L, Bi G, Zhao P, Clement KMT, Liang J, Cai L.
タイトル Biosurveillance of Invasive Southern Corn Rust: Insights Into Recent Migration Patterns and Virulence Variation.
ジャーナル Mol Plant Pathol
Abstract Emerging pathogen races spreading via long-distance migration increasingly threaten global agricultural ecosystems. Understanding how pathogens migrate and adapt to new hosts via virulence evolution is crucial for developing strategies to mitigate future crop damage. Here we performed biosurveillance of Puccinia polysora, a global fungal pathogen causing southern corn rust (SCR), across China, Thailand and the Philippines. By analysing 193 field transcriptomic data, we detected both epidemic and endemic lineages co-circulating in each country and elucidated the crucial role of host selection in driving the diversification of endemic lineages. Gene flow assessments and trajectory tracking indicated that the SCR infection source in northern China is likely of domestic origin and pathogen migration from the Philippines/Thailand into China is restricted to Hainan, coastal Guangdong and southern Yunnan. We detected country-specific variants in 32 effector genes, with AvrRppC exhibiting the strongest positive selection. A phylogenetically distinct Luzon Island lineage (Philippines), carrying a novel AvrRppC allele capable of overcoming RppC-mediated resistance and represents a potentially invasive threat. Finally, we reviewed the global migration history of P. polysora in light of our findings. Our work represents the first step toward establishing an international surveillance network for P. polysora and emphasised a comprehensive control strategy integrating local governance and invasion prevention of international races.
巻・号 26(10)
ページ e70159
公開日 2025-9-30
DOI 10.1111/mpp.70159
解説 J-OBIS data were referenced. NIES data were referenced. BiodiC-J data were referenced.
PMID 41029028
PMC PMC12483992
MeSH China Genetic Variation Introduced Species Philippines Phylogeny Plant Diseases* / microbiology Puccinia* / genetics Puccinia* / pathogenicity Thailand Virulence / genetics Zea mays* / microbiology
IF 4.326
リソース情報
GBIF Marine Biological Sample Database, JAMSTEC Ascidiacea specimens of Ryukyu University Museum (Fujukan) Vascular Plants Collection of National Museum of Nature and Science Fungal Specimens of Sagamihara City Museum Plant specimens of Otaru Museum Odonata Specimens of Yamaguchi prefectural Yamaguchi Museum Project for Reef Fish Monitoring Sakurai Insect Specimens Collection of Tamarokuto Science Center Kelp Dataset The Shigeru Eda Insect Collection of The University Museum, The University of Tokyo Insect specimens of Mie Prefectural Museum Specimen based records and geographic locations of carabid beetles (Coleoptera) collected mainly by Dr. Kazuo Tanaka Insect specimen database of Kanagawa Prefectural Museum of Natural History Fossil specimens in the Museum of Nature and Human Activities, Hyogo Prefecture, Japan Arthropod specimens of Natural History Museum, Kishiwada City Herpetological specimens of Okinawa Prefectural Museum & Art Museum Gunma Museum of Natural History, Crustacea Specimens Crustacean collection of the National Museum of Nature and Science Hemiptera (Heteroptera) collection of National Museum of Nature and Science Amphibian Specimens of the Yamagata Prefectural Museum Reptile specimens of Yamagata Prefectural Museum The south coast survey of Hatakejima Islands from 1969 Cnidarian Specimens of the Yamagata Prefectural Museum Annelida collection of National Museum of Nature and Science Captive Primate Specimens of Japan Monkey Centre Vascular plant collection of Botanic Garden, Field Science Center for Northern Biosphere, Hokkaido University Brachiopoda Specimens of the Yamagata Prefectural Museum Survey data of seagrass beds on the Monitoring sites 1000 project, BDCJ The entire coast survey of Hatakejima Islands from 1983 Tardigrad collection of the National Museum of Nature and Science Fossil specimens of Toyama Science Museum Plant specimens of Komatsu City Museum Lepidoptera specimen database of Japan Fungi Specimens of The Cattle Museum Nagoya-Mammals Bryophyte specimens of Iwate Prefectural Museum Araneae Specimens of Kawasaki Municipal Science Museum Vascular plant specimens of Akita Prefectural Museum Fossil specimens of Bihoro Museum Kyushu University Museum Coleoptera Collection Akita Prefectural Museum, Insect Collection The Suguru Igarashi Insect Collection (Lepidoptera: Papilionidae) of The University Museum, The University of Tokyo Crustacea Collection of Natural History Museum and Institute, Chiba Reptilian specimens of Tochigi Prefectural Museum Marine Invertebrata specimens deposited in the Fukui City Museum of Natural History, Japan Tertiary vertebrate collection at Osama Museum of Natural History Insect specimens of Sugadaira Montane Research Center, University of Tsukuba Annelid Specimens of the Yamagata Prefectural Museum Insect specimens of Yonezawa Insectarium Arachnid specimens of Okinawa Prefectural Museum & Art Museum Vertebrate (mainly Primates) collection of Center for the Evolutionary Origins of Human Behavior, Kyoto University Amphibian specimens of Kanagawa Prefectural Museum of Natural History Type Collection of the Seto Marine Biological Laboratory, Kyoto University Invertebrate collection of the Seto Marine Biological Laboratory, Kyoto University Mollusca Collection of the Seto Marine Biological Laboratory, Kyoto University Insect Specimens Deposited in Saga Prefectural Space and Science Museum, JAPAN Biological Resource Center, Department of Biotechnology, National Institute of Technology and Evaluation Arthropoda Collection of the Seto Marine Biological Laboratory, Kyoto University Apterygota Collection of Saitama Museum of Natural History Cnidaria Collection of the Seto Marine Biological Laboratory, Kyoto University Mollusca Collection of Saitama Museum of Natural History Seaweed (Plantae) Collection of the Seto Marine Biological Laboratory, Kyoto University Vascular plants database of Atsugi City Museum Bacteria Collection of the Seto Marine Biological Laboratory, Kyoto University Chromista Collection of the Seto Marine Biological Laboratory, Kyoto University Birds collection of Abiko City Museum of Birds Akita Prefectural Museum, Hiroki Watanabe Collection Mollusca Collection of Natural History Museum and Institute, Chiba Bird specimens of the Yamashina Institute for Ornithology Herbarium, University Archives and Collections, Fukushima University, Japan (FKSE) Crustacean specimens of Bihoro Museum Bryophytes specimens of Okinawa Prefectural Museum & Art Museum Hemichordata collection of National Museum of Nature and Science Mollusca specimens of Oiso Municipal Museum Algae collection of Museum of Natural and Environmental History, Shizuoka Fern (Pteridophyta) specimens of Toyama Science Museum Angiospermatatophytina Collection of Saitama Museum of Natural History Insect specimens of Natural History Museum, Kishiwada City Butterfly Specimens of Yamaguchi Prefectural Yamaguchi Museum Nemertean specimens of Ryukyu University Museum (Fujukan) Chironomid Specimen records in the Chironomid DNA Barcode Database. Myxomycota collection of Sugadaira Research Station, Mountain Science Center, University of Tsukuba Insect Specimens of the Yamagata Prefectural Museum Insect specimens of Bihoro Museum Nagoya-CR Insect Specimens of Ibaraki University (Faculty of Science) URM Fish Collection Bird specimens of Natural History Museum, Kishiwada City Plant specimens of Ishikawa Museum of Natural History Nagoya-IN Crabs from Vietnam and Indonesia Crustacean Specimens of the Yamagata Prefectural Museum Myriapod Specimens of the Yamagata Prefectural Museum Fungal specimens of Bihoro Museum Occurrence dataset of demersal fish and benthic organisms in the deep-sea off the northeastern coast of Japan, recorded by ROV after the 2011 Earthquake off the Pacific coast of Tohoku Lichen specimens of Saitama Museum of Natural History Spider specimens of Kushiro City Museum Mammal specimens of Obihiro Centennial City Museum Acoustic monitoring data of avian species inside and outside the evacuation zone of the Fukushima Daiichi power plant accident Psocodea (Mallophaga) collection of National Museum of Nature and Science Sipunculan Specimens of the Yamagata Prefectural Museum Flora of Japan Specimen Database Bryozoa Specimens of the Yamagata Prefectural Museum Survey data of rocky shores on the Monitoring sites 1000 project, BDCJ Vascular plant specimens of the Kagoshima Prefectural Museum The Suguru Igarashi Insect Collection (Lepidoptera: Hesperiidae) of The University Museum, The University of Tokyo The Keiichi Omoto Butterfly Collection(Papilionidae), The University Museum, The University of Tokyo Bryophyte specimens of Nagano Environmental Conservation Research Institute, Nagano Prefecture Effects of temperature and red tides on sea urchin abundance and species richness over 45 years in southern Japan Gymnospermatatophytina Collection of Saitama Museum of Natural History Species list recorded by baited cameras at deep sea area in Japan Cetacean Stranding Data in Hokkaido Database of Aquatic Macrophytes in Japanese lakes Mollusca specimens of Toyama Science Museum Mollusca collection of National Museum of Nature and Science Avian Specimens of the Yamagata Prefectural Museum Mollusca specimens of Okinawa Prefectural Museum & Art Museum Bryophyta Collection of Saitama Museum of Natural History Pteridophyte specimens of Okinawa Prefectural Museum & Art Museum Ascidian Specimens of the Yamagata Prefectural Museum Lichen specimens of Kushiro City Museum Insect Specimens of Gunma Insect World The Magoshichi Suda Insect Collection, The University Museum, The University of Tokyo. Coleoptera 2 (Disteniidae, Cerambycidae & Chrysomelidae (1)) Bryophyte specimens of Kanagawa Prefectural Museum of Natural History Bird Specimens of Botanic Garden, Field Science Center for Northern Biosphere, Hokkaido University Insect specimens of Okinawa Prefectural Museum & Art Museum Ichthyological collection of Marine Science Museum, Tokai University Fungi specimens of Saitama Museum of Natural History Bird Collection of Yokosuka City Museum Cnidaria specimens of Ryukyu University Museum (Fujukan) Bryophyte Specimens of Ishikawa Museum of Natural History (ISKW) Paleobotany collection of National Museum of Nature and Science Insect specimens of Himeji City Science Museum Insect Collection of Yokosuka City Museum Plant Specimens of The Cattle Museum Plant specimens of Horaiji-san Museum of Natural History Toji K. collection Long-term fauna and flora records of the experimental forests of the Forest Research Station of Hokkaido University, Japan Spermatophyte collection of Himeji City Science Museum DNA barcoding on chironomid specimens collected from ponds in Hyogo, Japan Mammalian Specimens of the Yamagata Prefectural Museum CMarZ (Census of Marine Zooplankton)-Asia Database Image Database of Fishes in the Kanagawa Prefectural Museum of Natural History Fish Specimens of the Yamagata Prefectural Museum Bird specimens of Okinawa Prefectural Museum & Art Museum The 6-7th National Survey on the Natural Environment: Vegetation Survey Plant specimens of Toyota City Nature Sanctuary Echigo-Matsunoyama Museum of Natural Science, Usuke Shiga butterfly collection Plant specimens of Tochigi Prefectural Museum Crustacean Specimens of the Famous collector Mr. Seiji Nagai Mollusca collection of Yamaguchi prefectural Yamaguchi Museum Mammal specimens of Okinawa Prefectural Museum & Art Museum The Araneae Collection of the National Museum of Nature and Science Plant specimens of Nasunogahara Museum Bee occurrence data collected in "Hanamaru-Maruhana national census (Bumble bee national census)" in Japan Bivalve Specimens of the Yamagata Prefectural Museum Ferns and Lycophytes Specimens of Kawasaki Municipal Science Museum JAMSTEC_MULTISPLASH2006_SagamiBay_Siphonophora Herbarium Specimens of The Kagoshima University Museum (KAG) Fish collection of Yamaguchi prefectural Yamaguchi Museum Bird specimens of Himeji City Science Museum Shallow-water fauna of Sagami Bay Kinorhyncha specimens of Ryukyu University Museum (Fujukan) Diptera collection of National Museum of Nature and Science Insect specimens of Otaru Museum Biodiversity monitoring in Nakaikemi-shicchi Insect specimens of Kaizuka City Museum of Natural History Vascular plant specimens of Iida City Museum Fish specimens of Bihoro Museum Organisms observed during the Shipboard Oceanographic Laboratory 3, Department of Marine Biology, Tokai University Bryophyte collections of Hattori Botanical Laboratory Reptile specimens of Kanagawa Prefectural Museum of Natural History Mammal assemblages recorded by camera traps inside and outside the evacuation zone of the Fukushima Daiichi Nuclear Power Plant accident Myriapoda Insect specimens of Rikuzen-Takata City Museum Scleractinia specimens of Kuroshio Biological Research Foundation Insect specimens of Iwate Prefectural Museum The Acari Collection of the National Museum of Nature and Science Lancelet specimens of Ryukyu University Museum (Fujukan) A nest-site survey of Barn swallow at railroad stations in the Kinki District,south-central Japan Fish specimens of Natural History Museum, Kishiwada City Japanese Woody Plants Specimens of echinodermata collection of Wakayama Prefectural Museum of Natural History Plant specimens of Natural History Museum, Kishiwada City Spider specimen data from Satoyama landscapes, including abandoned farmland, collected over multiple periods in Machida City, Tokyo Herbaceous and arboreous plants list on the Komaba Campus of University of Tokyo, Japan Insect specimens of Toyota City Nature Sanctuary Bird Specimens in the Museum of Nature and Human Activities, Hyogo, Japan Molluscan Specimens of the Yamagata Prefectural Museum Survey data of algal beds on the Monitoring sites 1000 project, BDCJ Vascular Plant Specimens of Yamagata Prefectural Museum Asia-Pacific Dataset Invertebrate specimens in the Wakayama Prefectural Museum of Natural History, Japan. Nagoya-Plants Hymenoptera specimen database of Kyushu University Insect specimens of Natural Museum of Geihoku Lichen specimens of Okinawa Prefectural Museum & Art Museum Echinoderm collection of National Museum of Nature and Science Moth collecting data in Mori, Tojo, Hiroshima The Suguru Igarashi Insect Collection (Lepidoptera: Lycaenidae) of The University Museum, The University of Tokyo Vascular Plants Specimens of Ehime Prefectural Science Museum Mammal specimens of Ryukyu University Museum (Fujukan) Bird specimens of Kawasaki Municipal Science Museum Fish Specimens of Water Environmental Field Station, Global and Local Environment Co-creation Institute, Ibaraki University Vascular plant specimens of the herbarium of the Tohoku University (TUS) Spermatophyta Specimens of Kawasaki Municipal Science Museum Gorgonacea specimens of Kuroshio Biological Research Foundation Botanical collection of Gifu Prefecture Museum Algae specimens of Ryukyu University Museum (Fujukan) Crustacea specimens of Wakayama Prefectural Museum of Natural History The Magoshichi Suda Insect Collection, The University Museum, The University of Tokyo. Coleoptera 3 (Geotrupidae) Xiphosuran collection of the National Museum of Nature and Science Nagoya-SP Plankton image dataset from a cabled observatory system (JEDI System/OCEANS) deployed at coastal area of Oshima island, Tokyo, Japan Lepidoptera Moths Specimens of Yamaguchi prefectural Yamaguchi Museum Spider specimens of Iwate Prefectural Museum Crustacean specimens of Kitakyushu Museum of Natural History & Human History Aschelminth collection of National Museum of Nature and Science NIAES microbial inventory, "microForce" microbe collection, Tsukuba, National Institute for Agro-Environmental Sciences, Japan Plant Specimens collections of the Kyushu University Museum Occurrence data of seagrasses in Southeast Asia extracted from literature Environmental baseline data in abyssal plain off Minami Torishima based on megafauna occurrence Vertebrate specimens of Kumamoto City Museum Reptile specimens of Takatsuki Nature Museum (Aquapia Akutagawa) Microalgal collection of National Museum of Nature and Science (TNS) The Masayo Kato Insect Collection (Hymenoptera) of The University Museum, The University of Tokyo Bird specimens of Obihiro Centennial City Museum Insect specimens of Kushiro City Museum Insect species recorded in sugarcane fields of Khon Kaen Province, Thailand, over three seasons in 2012 Yasuhiro Fudouji Specimens of Saga Prefectural Space and Science Museum Marine Invertebrata specimen database of Osaka Museum of Natutal History Plantae collection of Hokkaido Museum Data on coral species occurrences in Japan since 1929 Sipuncula collection of National Museum of Nature and Science Entomological Specimens of Museum of Nature and Human Activities, Hyogo Pref., Japan Fish monitoring data in Lake Kasumigaura Insect Collection in Shiojiri City Museum of Natural History Bird Specimens of The Cattle Museum RIKEN BioResource Center, Experimental Animal Division Insect Specimens of Kitami Region Museum of Science History and Art Ogasawara DNA barcode database Lichen Specimens of Toyota City Nature Sanctuary (TCNS). Invertebrate collection of Hokkaido Museum Tree survey in the tropical forest of Pasoh Forest Reserve, Malaysia from 2016 to 2018 Specimens of the special Research of National Nara Women's University of Japan - linked environmental structures in the river drainage basin between the river source and river mouth - From a comparison among the rivers in the Kii Peninsula Invertebrate specimens (except for arthropods and mollusca) of Natural History Museum, Kishiwada City Insect specimens of Sagamihara City Museum Gunma Museum of Natural History, Bryophyta Specimen Vertebrate fossil collection of National Museum of Nature and Science AIS Wildtype Populations of Arabidopsis Echinodermata Specimens of the Yamagata Prefectural Museum Morihiro Tozu Specimens of Saga Prefectural Space and Science Museum Amphibian specimens of Obihiro Centennial City Museum Ehime University Coleoptera Collection Plant Specimen Database of Tama Forest Science Garden, Forestry and Forest Products Research Institute, Japan Vascular plant specimens of Omachi Alpine Museum Araneae collection of Kanagawa Prefectural Museum of Natural History Mammal specimens of Oiso Municipal Museum Monitoring Sites 1000 Satoyama Mammals Migratory shorebirds (sandpipers and plovers) in Hokkaido Echinoderm specimens of Ryukyu University Museum (Fujukan) Flatworm specimens of Ryukyu University Museum (Fujukan) Insect specimens of Obihiro Centennial City Museum Lepidoptera collection of National Museum of Nature and Science Molluscan specimens of Bihoro Museum Platyhelminth collection of National Museum of Nature and Science Bird specimens of Kushiro City Museum Sponge collection of National Museum of Nature and Science Fossil Marine benthic animal data along Yokohama City Coast Cnidarians Specimens of Akita Prefectural Museum Fossil specimens of Tochigi Prefectural Museum Specimens of Phylum Porifera of Akita Prefectural Museum Coastal Ecosystem Monitoring in the Tsugaru strait side of Shimokita Insect specimens of Ryukyu University Museum (Fujukan) Crustacea specimens of Kuroshio Biological Research Foundation Insects Specimens of Kagoshima Prefectural Museum Vascular Plant Specimen database of Kanagawa Prefectural Museum of Natural History Molluscan specimen database of Kanagawa Prefectural Museum of Natural History Insects specimen database of Osaka Museum of Natural History Birds Specimens of Akita Prefectural Museum Mammal specimen database of Kanagawa Prefectural Museum of Natural History Araneidae specimen database of Osaka Museum of Natural History Orthoptera collection of Hiratsuka City Museum Arthropoda (excepting insect) collection of Osaka Museum of Natural History Insect specimen database of Atsugi City Museum Gunma Museum of Natural History, Vascular Plant Specimen Gunma Museum of Natural History, Fungi Specimen Gunma Museum of Natural History, Insect Specimen The 24th field study tour in Sesoko, Okinawa - a citizen science, observations of invertebrates Gunma Museum of Natural History, Molluscan Specimen Amphibian specimens of Toyama Science Museum Gunma Museum of Natural History, Fish Specimen Arthropoda specimens of Toyama Science Museum Gunma Museum of Natural History, Amphibia and Reptile Specimen Invertebrate (minor phyla) collection of Osaka Museum of Natural History Gunma Museum of Natural History, Mammal Specimen Pycnogonidea specimens of Kuroshio Biological Research Foundation Plankton&BenthosResearch Insect Collection of Natural History Museum and Institute, Chiba Crustacean specimen database of Kanagawa Prefectural Museum of Natural History Hagfishes Specimens of Akita Prefectural Museum Fungi specimen database of Kanagawa Prefectural Museum of Natural History Bird specimen database of Kanagawa Prefectural Museum of Natural History Mollusca specimens of Kuroshio Biological Research Foundation Fungal Specimens of National Museum of Nature and Science (TNS) Vascular plants collection of Hiratsuka City Museum Herbarium of Hokkaido University Museum (SAPS) Molluscan collection of Osaka Museum of Natural History Lichen collection of Sugadaira Research Station, Mountain Science Center, University of Tsukuba Insecta collection of Museum of Natural and Environmental History, Shizuoka Plant specimens deposited in Osaka Museum of Natural History, Japan Cephalaspidomorphs Specimens of Akita Prefectural Museum Insect collection of Itami City Museum of Insects Vascular Plant Specimens of the URO Herbarium (Faculty of Education, University of the Ryukyus) Annelida specimens of Ryukyu University Museum (Fujukan) Bird specimens of Tochigi Prefectural Museum Crustacea specimens of Toyama Science Museum Plant specimens of Kushiro City Museum Vascular Plant Specimens of Kochi Prefectural Makino Botanical Garden Dry specimens of Recent Mollusca in the Department of Historical Geology and Paleontology, The University Museum, The University of Tokyo (UMUT) Ascidians Specimens of Akita Prefectural Museum Specimens of Class Pycnogonida of Akita Prefectural Museum The Magoshichi Suda Insect Collection, The University Museum, The University of Tokyo. Coleoptera I (Scarabaeidae) Insect specimens of Oiso Municipal Museum Mollusca specimens of Ryukyu University Museum (Fujukan) Algal Specimens of Coastal Branch of Natural History Museum and Institute, Chiba (CMNH) Plant Specimens of Wakayama Prefectural Museum of Natural History Bird specimens of Komatsu City Museum Insect specimens of Nasunogahara Museum Algae specimens of Kanagawa Prefectural Museum of Natural History Fish specimens of Takatsuki Nature Museum (Aquapia Akutagawa) Acoustic monitoring data of anuran species inside and outside the evacuation zone of the Fukushima Daiichi power plant accident Mammal Specimens of The Cattle Museum Fish collection of the Kagoshima University Museum Monitoring records of plant species in the Hakone region of Fuji-Hakone-Izu National Park, Japan, 2001-2010 Crabs from the Philippines and Thailand Specimens of Class Maxillopoda of Akita Prefectural Museum Echinoderms Specimens of Akita Prefectural Museum Mammal specimens of Takatsuki Nature Museum (Aquapia Akutagawa) Zoological specimens of Gifu Prefectural Museum Bryophyte Collection of Natural History Museum and Institute, Chiba Plant Specimens of The Shimane Nature Museum of Mt. Sanbe Fossil specimens of Iwate Prefectural Museum A Record of the Intertidal Malacofauna of Cape Bansho, Wakayama, Japan, from 1985 to 2010 Plant specimens of Oiso Municipal Museum Actinopterygius Specimens of Akita Prefectural Museum Plant specimens of Horaiji-san Museum of Natural History Kichi T. collection Bryophyte specimens of The Nagoya University Museum Environmental baseline data in abyssal plain off Minami Torishima based on physicochemical parameters and meiofauna community obtained from the 2022 cruise Mollusk Collection of Yokosuka City Museum Amphibians Specimens of Akita Prefectural Museum Molluscan fossils of Natural History Museum and Institute, Chiba Shellfish specimens of Miyazaki Prefecture Museum of Nature and History Vascular Plant Collection of Natural History Museum and Institute, Chiba Bird specimens of Miyazaki Prefecture Museum of Nature and History Protochordata collection of National Museum of Nature and Science NODAI Culture Collection Center, Tokyo University of Agriculture, Japan Centipedes Specimens of Akita Prefectural Museum Fossil Specimens of The Cattle Museum Echinodermata specimens of Kuroshio Biological Research Foundation Annual Census on Waterfowl (Anatidae) Population Coleoptera Specimens of Yamaguchi prefectural Yamaguchi Museum Bryozoans Specimens of Akita Prefectural Museum The Myriapoda Collection of the National Museum of Nature and Science Pycnogonid collection of the National Museum of Nature and Science Fish specimens of Okinawa Prefectural Museum & Art Museum A dataset for vascular plant diversity monitoring for the natural World Heritage site on Amami-Oshima Island, Tokunoshima Island, and the northern Okinawa Island Fungal Collection of Natural History Museum and Institute, Chiba Spermatophytes collection of Okinawa Prefectural Museum & Art Museum Plant specimens of Kiritappu Wetland Center Survey data of tidal flats on the Monitoring sites 1000 project, BDCJ Bryophytes specimens of Mitake Visitor Center Neuroptera collection of National Museum of Nature and Science Other Arachnida collection of National Museum of Nature and Science Brachiopods Specimens of Akita Prefectural Museum Reptile Specimens of Natural History Museum, Kishiwada City Insecta specimens of Okutama Visitor Center, Tokyo Echiurans Specimens of Akita Prefectural Museum Odonata collection of National Museum of Nature and Science Tatsuo Yamazaki Specimens of Saga Prefectural Space and Science Museum Invertebrate fossil collection of National Museum of Nature and Science Bryophytes specimens of Akita Prefectural Museum Fungal specimens of Faculty of Agriculture and Life Science, Hirosaki University Fossil Specimens of Ibaraki Nature Museum Tamio Nishida Specimens of Saga Prefectural Space and Science Museum Diversity and community structure of pelagic cnidarians in south-east Asian tropical marginal Seas Bryophyte Collection of Museum of Natural and Environmental History, Shizuoka Tentaculata collection of National Museum of Nature and Science Herbarium Specimens of Museum of Nature and Human Activities, Hyogo Pref., Japan Pogonophoran collection of the National Museum of Nature and Science The Keiichi Omoto Butterffly Collection, The University Museum, The University of Tokyo (Nymphalidae: Satyrinae) Insect Collection of Saitama Museum of Natural History Lepidopterous specimens of Yamagata Prefectural Museum Monitoring Sites 1000 Satoyama Birds Toshiaki Tanaka Specimens of Saga Prefectural Space and Science Museum Mammalians Specimens of Akita Prefectural Museum Genebank, National Institute of Agrobiological Sciences Underwater video and still-image dataset of fishes and other aquatic animals in Lake Biwa, Japan, observed via carp-mounted video loggers. Marine specimens of Misaki Marine Biological Station, Graduate School of Science, The University of Tokyo Mollusca specimens of Manazuru Shell Museum Gunma Museum of Natural History, Arachnid Specimens Fossil Specimens of Komatsu City Museum Malacostracans Specimens of Akita Prefectural Museum Insecta Specimens of Kawasaki Municipal Science Museum Mollusca specimens of Natural History Museum, Kishiwada City Specimens of Phylum Nemertea of Akita Prefectural Museum Observation records of Amphibians Amphibian specimens of Takatsuki Nature Museum (Aquapia Akutagawa) Mammal specimens of Komatsu City Museum Vascular Plant Specimens of the RYU Herbarium (Faculty of Science, University of the Ryukyus) Fossil collection of Hokkaido Museum Herpetological (amphibian & reptile) specimens of Ryukyu University Museum (Fujukan) Xenacoelomorpha collection of National Museum of Nature and Science Mammal specimens of Kawasaki Municipal Science Museum Coleoptera collection of National Museum of Nature and Science Fish Collection of Coastal Branch of Natural History Museum and Institute, Chiba Insect specimens of Tokushima Prefectural Museum Bird specimens of Toyota City Nature Sanctuary Mammal specimens of Bihoro Museum Reptiles Specimens of Akita Prefectural Museum Annelids Specimens of Akita Prefectural Museum Mammal specimens of Tochigi Prefectural Museum Insect specimens of Hokkaido University Regionally Integrated Marine Database (RINKAI), managed by JAMBIO, an association of Japanese university-based marine stations Lichen specimens of Iwate Prefectural Museum Invertebrate specimens of Toyama Science Museum Forest monitoring data of 45 plots over the Japanese archipelago during the period of 1980-2021 Pteridophyta specimens of Iwate Prefectural Museum Molluscan specimens of Kaizuka City Museum of Natural History Fossil Specimens and Geological Specimens of The Cattle Museum Mammal specimens of Natural History Museum, Kishiwada City Fungal Specimens of Toyota City Nature Sanctuary (TCNS). Pteridophyta collection of Museum of Natural and Environmental History, Shizuoka Millipedes Specimens of Akita Prefectural Museum Hymenoptera collection of National Museum of Nature and Science The 2nd and 3rd National Survey on the Natural Environment: Vegetation Survey (common species) Gastropod Specimens of the Yamagata Prefectural Museum Chondrichthyans Specimens of Akita Prefectural Museum Decline in the Acropora population due to repeated moderate disturbances in Okinotorishima Island, Japan Molluscus specimens of Toyohashi Museum of Natural History Kamptozoa collection of National Museum of Nature and Science Bird specimens of Takatsuki Nature Museum (Aquapia Akutagawa) Ibaraki Nature Museum, Arthropoda collection Japan Collection of Microorganisms, RIKEN BioResource Center Records of flower visitors in Japanese crops Vascular plant collection of J.F. Oberlin University Ibaraki Nature Museum, Mollusk collection Insecta specimens of Takao Visitor Center Plant specimens of Bihoro Museum Bird specimens of Bihoro Museum Fish specimens of Kaizuka City Museum of Natural History Microfossils of Natural History Museum and Institute, Chiba Chaetognatha collection of National Museum of Nature and Science The Kojiro Shiraishi Insect Collection of The University Museum, The University of Tokyo Taguchi Shellfish Specimens Collection of Tamarokuto Science Center The 2nd and 3rd National Survey on the Natural Environment: Vegetation Survey (rare species) Bryophyte specimens of Toyota City Nature Sanctuary (TCNS). Spermatophyta collection of Museum of Natural and Environmental History, Shizuoka The Yasunobu Naritomi Butterffly Collection, The University Museum, The University of Tokyo. Microbial Culture Collection, National Institute for Environmental Studies Bryophyte specimens of Toyama Science Museum Ibaraki Nature Museum, Mammals collection Chromistal specimens of Kanagawa Prefectural Museum of Natural History Occurrence data of woody plants in the Ginkakuzi-san National Forest Ibaraki Nature Museum, Fish collection Aves collection of Biodiversity Center of Japan, Ministry of the Environment (BDCJ) Plant specimens of Mie Prefectural Museum Metabarcoding data set at the Iheya-Minor Ridge in the Sakai hydrothermal vent field Pisces specimens of Tochigi Prefectural Museum Ibaraki Nature Museum, Birds collection Gunma Museum of Natural History, Invertebrate fossil Specimen Crustacea specimens of Okinawa Prefectural Museum & Art Museum Mammal collection of Biodiversity Center of Japan, Ministry of the Environment (BDCJ) Fish Collection of Yokosuka City Museum Specimen-based records of geometrid, pyralid, and crambid moths (Lepidoptera) with location information from the collection of Dr. Hiroshi Inoue Bird specimens of Oiso Municipal Museum Ibaraki Nature Museum, Bryophyta collection Herbarium Specimens of Bonin and Ryukyu Islands Ibaraki Nature Museum, Amphibians and Reptiles collection Insect specimens of Tochigi Prefectural Museum The Suguru Igarashi Insect Collection (Lepidoptera: Pieridae) of The University Museum, The University of Tokyo Ibaraki Nature Museum, Fungi collection Vertebrate fossils of Natural History Museum and Institute, Chiba (CBM) Ibaraki Nature Museum, Algae collection Crustacea specimens of Ryukyu University Museum (Fujukan) A crowdsourcing approach to collecting photo-based insect and plant observation records Insect specimens Kubo collection of Takatsuki Nature Museum (Aquapia Akutagawa) Fish Collection of Hokkaido University Ibaraki Nature Museum, Lichen collection Amphibian Specimens of Natural History Museum, Kishiwada City Fixed Point Survey for Shorebirds of the family Scolopacidae and Charadriidae FRA-PLANKTON DATASET Porifera Specimens of the Yamagata Prefectural Museum Hemiptera (Homoptera) collection of National Museum of Nature and Science Fish specimens of Ryukyu University Museum (Fujukan) Lichen specimens of National Museum of Nature and Science (TNS) Database of Japanese semi-natural grassland flora The Masayo Kato Fungi Collection, The University Museum, The University of Tokyo. Bird specimens of Saitama Museum of Natural History The Masayo Kato Insect Collection (Lepidoptera: Rhopalocera) of The University Museum, The University of Tokyo Bryophyte specimens of National Museum of Nature and Science (TNS) Shellfish specimens of the Nishinomiya Shell Museum, Japan Fish collection of the Museum of Nature and Human Activities, Hyogo Fish specimens of Toyama Science Museum Insect specimens of Obihiro Centennial City Museum Benthos collection of the Museum of Nature and Human Activities, Hyogo Marine decapod crustaceans of the San'in District Akita Prefectural Museum, Observation Records of Birds in Akita Prefecture The Insect Collection of Prof. Chûjirô Sasaki and associated researchers, The University Museum, The University of Tokyo. Hokkaido University Coleoptera Collection Ibaraki Nature Museum, Vascular Plants collection Vascular plant collection of The University of Tokyo (Botanical Garden) Gunma Museum of Natural History, Vertebrate Fossil Specimen Vascular plant specimens of Sugadaira Research Station, Mountain Science Center, University of Tsukuba Specimen-based records and geographic locations of brittle stars (Echinodermata) collected from Sagami Bay Macroalgal collection of National Museum of Nature and Science (TNS) Environmental baseline data in abyssal plain off Minami Torishima based on physicochemical parameters and meiofauna community Vascular plant collection of The University Museum, The University of Tokyo Herbarium of Shinshu University NIAES Coleoptera Specimen Database The Masao Oita Insect Collection of The University Museum, The University of Tokyo Plant specimens of Parthenon Tama Museum (PTHM) Vertebrate specimens of Iwate Prefectural Museum Vascular plant specimens of National Museum of Nature and Science (TNS) Lichen specimen database of Faurie collection Kitami Region Museum of Science History and Art(KIRM) Plant specimens of Obihiro Centennial City Museum Myxomycete specimens of National Museum of Nature and Science (TNS) Vascular plant specimens of Nagano Environmental Conservation Research Institute, Nagano Prefecture The Yasunori Kishida Insect Collection (Coleoptera: Disteniidae and Cerambycidae) of The University Museum, The University of Tokyo Insect specimens of Kashihara City Museum of Insect Plant Observation Records of Japan Plant Specimens of Kurashiki Museum of Natural History Herbarium Specimens of Tokushima Prefectural Museum, Japan Insect collection of Komaba Museum, University of Tokyo Bird specimens of Ryukyu University Museum (Fujukan) Environmental baseline data in abyssal plain off Minami Torishima based on megafauna occurrence obtained from the 2022 cruise Mammal specimens of Saitama Museum of Natural History Botanical Specimens of Kaizuka City Museum of Natural History (KCMN) Amphibian and reptile specimens of Bihoro Museum Fish Specimens of Tokushima Prefectural Museum, Japan Protozoa collection of National Museum of Nature and Science Insect collection of Biodiversity Center of Japan, Ministry of the Environment Hymenoptera Specimens of Yamaguchi prefectural Yamaguchi Museum Insect Specimen Database of Fukui City Museum of Natural History Tracheophyta collection of Biodiversity Center of Japan, Ministry of the Environment Insect specimens of Omogo Mountain Museum Moss specimens of Kushiro City Museum Fungal specimens of Komatsu City Museum Fish Specimens of Graduate School of Bioresources Mie University Arachnid specimens of Ryukyu University Museum (Fujukan) Osaka Prefectural Minoh Park Insects Museum Microfossil collection of National Museum of Nature and Science Distribution of Stylaraea punctata (Linnaeus, 1758) in Okinawa Island, Japan Herbarium of Kitakyushu Museum of Natural History and Human History Mollusca specimens of Wakayama Prefectural Museum of Natural History Bryophyte specimens database of Mr. Tsutomu Kodama collection Vascular plant specimens of The Shirakami Research Center for Environmental Sciences, Hirosaki University Mollusc specimens of Parthenon Tama Museum (PTHM) Fish specimen database of Osaka Museum of Natural History Diptera Specimens of Yamaguchi prefectural Yamaguchi Museum Fish, Amphibian, Reptile Specimens of The Cattle Museum Hymenopteran specimen database of Osaka Museum of Natural History Hemiptera Specimens of Yamaguchi prefectural Yamaguchi Museum Vascular plant specimens of Aomori City Forestry Museum Asahikawa Educational College herbarium Amphibian specimens of Tochigi Prefectural Museum Bryophyte collection of Herbarium of Hiroshima University Reptile Collection of Osaka Museum of Natural History JODC Dataset Ground Beetle of Japan Specimen Database Fish collection of National Museum of Nature and Science Insecta collection of Ishikawa Museum of Natural History (ISKW) Dataset from Snapshot Japan 2023 Bird collection of National Museum of Nature and Science Invertebrate specimens of Tochigi Prefectural Museum Bird specimens of Mie Prefectural Museum Mammal collection of National Museum of Nature and Science Mammal specimens of Toyota City Nature Sanctuary Freshwater Fish Specimens of Lake Biwa Museum Plant specimens of the Museum of Yamagata University Plant specimens of Toyota City Nature Sanctuary (from non-museum circle) Monitoring of deep-sea fish diversity using environmental DNA metabarcoding of pumped deep-sea water in Sagami and Suruga Bays, Japan Brown algae specimens of Komatsu City Museum Fish Collection of Natural History Museum and Institute, Chiba Mycological Collection of Osaka Museum of Natural History Vascular plant specimens of Toyama Science Museum Plant Specimens of Lake Biwa Museum Invertebrate fossils of Natural History Museum and Institute, Chiba Simultaneous surveys of littoral organisms in Osaka Bay Spermatophyta specimens of Iwate Prefectural Museum Crustacean specimens of Kaizuka City Museum of Natural History Rust fungus specimen of Research Group of Plant Parasitic Mycology, Faculty of Life and Environmental Sciences, University of Tsukuba Insect specimens of Komatsu City Museum A Specimen List of Hymenophyllaceae of Seram and Ambon collected on Indonesian-Japanese botanical expeditions 1983–1986 Insect specimens of Toyama Science Museum Specimen records of spiders (Arachnida: Araneae) by monthly census for 3 years in forest areas of Yakushima Island, Japan Plant specimens of Takatsuki Nature Museum (Aquapia Akutagawa) Coelenterata (Cnidaria and Ctenophora) collection of National Museum of Nature and Science Image dataset of ophiuroid and other deep sea benthic organisms in 2015 extracted from the survey off Sanriku, Japan, by the research following the Great East Japan Earthquake 2011 Fossil specimens in Saga Prefectural Space and Science Museum Specimen collection of Japanese mud shrimp (Upogebia major) in Japan Aracnid Specimen Collection Deposited in Echigo-Matsunoyama Museum of Natural Science Herpetological collection of National Museum of Nature and Science Mesozoa collection of National Museum of Nature and Science Plant distribution data with photograph Fish Collection of Kanagawa Prefectural Museum of Natural History Kyoto University Reptile Collection Vascular Plants Collection of Sagamihara City Museum Fungi specimens of Kawasaki Municipal Science Museum Mollusca collection, Museum of Natural and Environmental History, Shizuoka Plant specimens in the Museum of Nature and Human Activities, Hyogo Prefecture, Japan Insect specimens in the Museum of Nature and Human Activities, Hyogo Prefecture, Japan Freshwater Fish specimens of Taga Town Museum, Shiga Pref., Japan Freshwater shellfish specimens of Taga Town Museum, Shiga Pref., Japan Mammals specimens of Taga Town Museum, Shiga Pref., Japan Insect specimens of Taga Town Museum, Shiga Pref., Japan Plant specimens of Taga Town Museum, Shiga Pref., Japan Insect Specimens of Lake Biwa Museum Coleoptera specimen database of Osaka Museum of Natural History Lepidoptera specimen database of Osaka Museum of Natural History