RRC ID 87457
著者 Sanchez L, Loiseau N, Albouy C, Bruno M, Barroil A, Dalongeville A, Deter J, Durand JD, Faure N, Fopp F, Hocdé R, Jaquier M, Jiddawi NS, Jucker M, Juhel JB, Kadarusman, Marques V, Mathon L, Mouillot D, Orblin M, Pellissier L, Seguin R, Sugeha HY, Valentini A, Velez L, Vimono IB, Leprieur F, Manel S.
タイトル eDNA surveys substantially expand known geographic and ecological niche boundaries of marine fishes.
ジャーナル PLoS Biol
Abstract Assessing species geographic distributions is critical to approximate their ecological niches, understand how global change may reshape their occurrence patterns, and predict their extinction risks. Yet, species records are over-aggregated across taxonomic, geographic, environmental, and anthropogenic dimensions. The under-sampling of remote locations biases the quantification of species geographic distributions and ecological niche for most species. Here, we used nearly one thousand environmental DNA (eDNA) samples across the world's oceans, including polar regions and tropical remote islands, to determine the extent to which the geographic and ecological niche ranges of marine fishes are underestimated through the lens of global occurrence records based on conventional surveys. Our eDNA surveys revealed that the known geographic ranges for 93% of species and the ecological niche ranges for 7% of species were underestimated, and contributed to filling them. We show that the probability to detect a range filling for a given species is primarily shaped by the GBIF/OBIS sampling effort in a cell, but also by the number of occurrences available for the species. Most gap fillings were achieved by addressing a methodological sampling bias, notably when eDNA facilitated the detection of small fishes in previously sampled locations using conventional methods. Using a machine learning model, we found that a local effort of 10 eDNA samples would detect 24 additional fish species on average and a maximum of 98 species in previously unsampled tropical areas. Yet, a null model revealed that only half of ecological niche range fillings would be due to eDNA surveys, beyond a random allocation of classical sampling effort. Altogether, our results suggest that sampling in remote areas and performing eDNA surveys in over-sampled areas may both increase fish ecological niche ranges toward unexpected values with consequences in biodiversity modeling, management, and conservation.
巻・号 23(10)
ページ e3003432
公開日 2025-10-30
DOI 10.1371/journal.pbio.3003432
PII PBIOLOGY-D-25-00924
解説 J-OBIS data were referenced.
PMID 41166214
PMC PMC12574855
MeSH Animal Distribution Animals Biodiversity DNA, Environmental* / analysis DNA, Environmental* / genetics Ecosystem* Fishes* / classification Fishes* / genetics Fishes* / physiology Geography Oceans and Seas
IF 7.076
リソース情報
GBIF Organisms observed during the Shipboard Oceanographic Laboratory 3, Department of Marine Biology, Tokai University Asia-Pacific Dataset Marine Biological Sample Database, JAMSTEC Project for Reef Fish Monitoring Fish collection of the Kagoshima University Museum Actinopterygius Specimens of Akita Prefectural Museum Fish Collection of Hokkaido University Fish Specimens of Graduate School of Bioresources Mie University Fish specimen database of Osaka Museum of Natural History Fish collection of National Museum of Nature and Science Monitoring of deep-sea fish diversity using environmental DNA metabarcoding of pumped deep-sea water in Sagami and Suruga Bays, Japan Fish Collection of Natural History Museum and Institute, Chiba