Reference - Detail
| RRC ID | 89083 |
|---|---|
| Author | Zhang X, Chen X, Wu X, Liu Y, Wei Y. |
| Title | Genome-based reclassification of Micromonospora veneta Kaewkla et al. 2022 as a later heterotypic synonym of Micromonospora coerulea Jensen 1932 (Approved lists 1980). |
| Journal | Sci Rep |
| Abstract |
In this study, we aimed to clarify the taxonomic positions of Micromonospora veneta DSM 109713T and Micromonospora coerulea JCM 3175T using whole-genome phylogenetic analysis, pangenomic analysis and chemotaxonomic characteristics. The 16S rRNA gene sequences of veneta DSM 109713T and M. coerulea JCM 3175T were highly similar (99.2%), and in the phylogenetic trees constructed using whole genome sequences and 16S rRNA gene sequences, M. veneta DSM 109713T and M. coerulea JCM 3175T clustered together and formed a clade. The values of average amino acid (AAI), ANI-BLAST (ANIb) and ANI-MUMmer (ANIm), and digital DNA-DNA hybridization (dDDH) between M. veneta DSM 109713T and M. coerulea JCM 3175T were 97.57%, 97.81%, 98.40%, 85.0%, respectively, which are all greater than the thresholds used for species delimitation (AAI: 95.5%, ANI: 95-96%, and dDDH: 70%). Most phenotypic and chemotaxonomic features between the two species were similar, with only a few differences. Based on the combined evidence from genomic and phenotypic comparison, we propose Micromonospora veneta as a later heterotypic synonym of Micromonospora coerulea. |
| Volume | 15(1) |
| Pages | 27420 |
| Published | 2025-7-28 |
| DOI | 10.1038/s41598-025-13676-y |
| PII | 10.1038/s41598-025-13676-y |
| PMID | 40721945 |
| PMC | PMC12304198 |
| MeSH | Genome, Bacterial* Micromonospora* / classification Micromonospora* / genetics Phylogeny RNA, Ribosomal, 16S / genetics |
| Altmetric score |
オルトメトリクス指標項目
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| The most frequently cited source | Bluesky |
| Total number of mentions | 5 |
| Altmetric score changes over past 6months | 0.0 |
| Resource | |
| General Microbes | JCM3175 |