RRC ID 89834
Author Ban S, Yoshioka I, Mori Y, Yaguchi T.
Title Retrospective Analysis of Clinical Filamentous Basidiomycetes and Development of Multiplex PCR for Rapid Identification.
Journal Med Mycol J
Abstract Pathogenic basidiomycetes are increasingly recognized as causative agents of mycoses, particularly allergic bronchopulmonary mycosis (ABPM), in humans. To clarify their clinical significance, we analyzed the fungal species, their sources and associated diseases of 650 basidiomycetous strains preserved at the Medical Mycology Research Center, Chiba University, from 2010 to 2024. Schizophyllum commune was the most frequently isolated species (60%), followed by Trametes spp. (9.5%), Irpex spp. (5.2%), and Bjerkandera adusta (4.3%). Most isolates originated from respiratory specimens and were associated with ABPM, pneumomycosis, or sinusitis. These fungi often cannot be identified in culture because of their limited morphological characteristics. Therefore, we developed a multiplex polymerase chain reaction (PCR) assay targeting the internal transcribed spacer region for the rapid discrimination of S. commune, B. adusta, Irpex spp., and Trametes spp. Species- and genus-specific forward and reverse primers yielded distinct amplicon sizes for each target. The assay demonstrated high specificity and showed no cross-reactivity with non-target fungi; the results were concordant with those of rDNA sequencing. Multiplex PCR provides a rapid, cost-effective tool for identifying clinically important basidiomycetes, facilitating the timely diagnosis and management of fungal respiratory diseases.
Volume 67(1)
Pages 19-25
Published 2026-1-1
DOI 10.3314/mmj.25-00031
PMID 41765496
MeSH Basidiomycota* / classification Basidiomycota* / genetics Basidiomycota* / isolation & purification DNA, Fungal / genetics DNA, Ribosomal Spacer / genetics Humans Multiplex Polymerase Chain Reaction* / methods Mycological Typing Techniques Mycoses* / diagnosis Mycoses* / microbiology Sensitivity and Specificity
Resource
Pathogenic eukaryotic microorganisms Schizophyllum commune IFM 68183, Bjerkandera adusta IFM 68197, Irpex lacteus IFM 68000, Trametes hirsuta IFM 68196, Trametes coccinea IFM 65975, Trametes versicolor IFM 67923