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Species Resource Title
Pathogenic eukaryotic microorganisms 病原放線菌:IFM 10067、IFM 10881, IFM 10211 Gordonia crocea sp. nov. and Gordonia spumicola sp. nov. isolated from sludge of a wastewater treatment plant.
Human and Animal Cells MC3T3-E1(RCB1126) Phylogenetic scanning: a computer-assisted algorithm for mapping gene conversions and other recombinational events.
Xenopus tropicalis Elucidating the functional evolution of heat sensors among Xenopus species adapted to different thermal niches by ancestral sequence reconstruction.
Algae 4391 A photosynthetic alveolate closely related to apicomplexan parasites.
Drosophila Upper thermal limits of Drosophila are linked to species distributions and strongly constrained phylogenetically.
Drosophila E-24501 , E-18901 , E-24801 , E-17501 , E-12001 , E-14501 , E-10801 Hsp27 gene in Drosophila ananassae subgroup was split by a recently acquired intron.
Xenopus tropicalis Genome evolution in the allotetraploid frog Xenopus laevis.
Algae Contrasting biodiversity-ecosystem functioning relationships in phylogenetic and functional diversity.
Algae Inner ear development in cyclostomes and evolution of the vertebrate semicircular canals.
Algae Improved taxon sampling and multigene phylogeny of unicellular chlamydomonads closely related to the colonial volvocalean lineage Tetrabaenaceae-Goniaceae-Volvocaceae (Volvocales, Chlorophyceae).
Algae Improving phylogenetic inference of core Chlorophyta using chloroplast sequences with strong phylogenetic signals and heterogeneous models.
Prokaryotes E. coli Phylogenetic relationship of Paenibacillus species based on putative replication origin regions and analysis of an yheCD-like sequence found in this region.
Pathogenic microorganisms Nocardia shinanonensis sp. nov., isolated from a patient with endophthalmitis.
DNA material pAT-2 (RDB07118) , pAT-4 (RDB07119) , pHR-5 (RDB07120) , pHR-13 (RDB07121) , pSD-9 (RDB07122) , pGR-3 (RDB07136) , pMR-7 (RDB07137) , pMU-3 (RDB07182) , pMU-9 (RDB07183). Evolution of human Polyomavirus JC: implications for the population history of humans.
DNA material pTky-1 (RDB07252) , pTky-2a (RDB07253) , pAic-1a (RDB07254). Phylogenetic comparison between archetypal and disease-associated JC virus isolates in Japan.
General Microbes JCM 30185 Saccharopolyspora aidingensis sp. nov., an actinomycete isolated from a salt lake.
General Microbes JCM 21037 Shewanella carassii sp. nov., isolated from surface swabs of crucian carp and faeces of a diarrhoea patient.
General Microbes JCM 16395 Genome-level comparisons provide insight into the phylogeny and metabolic diversity of species within the genus Lactococcus.
General Microbes JCM 16711 Sphingomonas difficilis sp. nov., a difficultly cultivable bacterium that grows on solid but not in liquid medium, isolated from an abandoned lead-zinc mine.
General Microbes JCM 31587 Psedoduganella eburnea sp. nov., isolated from lagoon sediments.