RRC ID 11478
Author Wang C, Xu XX, Qu Z, Wang HL, Lin HP, Xie QY, Ruan JS, Hong K.
Title Micromonospora rhizosphaerae sp. nov., isolated from mangrove rhizosphere soil.
Journal Int J Syst Evol Microbiol
Abstract Strain 211018(T) was isolated from mangrove Excocaria agallocha rhizosphere soil. 16S rRNA gene sequence analysis showed the highest similarity to the type strains of Micromonospora olivasterospora DSM 43868(T) (98.6 %) and Micromonospora pattaloongensis TJ2-2(T) (98.4 %). gyrB gene sequence analysis also indicated that strain 211018(T) should be assigned to the genus Micromonospora. The characteristic whole-cell sugars are xylose, mannose and arabinose. The predominant menaquinone is MK-9(H(4)) and the major fatty acids are iso-C(15 : 0) (27.5 %), 10-methyl C(17 : 0) (14.2 %), C(17 : 1)ω8c (12.8 %), iso-C(16 : 0) (12.6 %), anteiso-C(15 : 0) (6.1 %), iso-C(17 : 0) (4.1 %) and anteiso-C(17 : 0) (4.0 %). The phospholipid profile comprises phosphatidylethanolamine, phosphatidylglycerol, phosphatidylinositol and phosphatidylinositol mannosides. The DNA G+C content is 70.8 mol%. The chemotaxonomic data of the strain coincided with those of the genus Micromonospora. Furthermore, a combination of DNA-DNA hybridization results and some physiological and biochemical properties indicated that the novel strain could be readily distinguished from the closest phylogenetic relatives. On the basis of these phenotypic and genotypic data, strain 211018(T) represents a novel species of the genus Micromonospora, for which the name Micromonospora rhizosphaerae sp. nov. is proposed. The type strain is 211018(T) (=CGMCC 4.5599(T) =DSM 45431(T)).
Volume 61(Pt 2)
Pages 320-324
Published 2011-2-1
DOI 10.1099/ijs.0.020461-0
PMID 20305066
MeSH Bacterial Typing Techniques Base Composition Carbohydrates / analysis China DNA, Bacterial / genetics Euphorbiaceae / microbiology* Fatty Acids / analysis Micromonospora / classification* Micromonospora / genetics Micromonospora / isolation & purification Molecular Sequence Data Phospholipids / analysis Phylogeny Rhizosphere* Sequence Analysis, DNA Soil Microbiology* Vitamin K 2 / analysis
IF 2.415
Times Cited 49
WOS Category MICROBIOLOGY
Resource
General Microbes JCM 7348 JCM 12833