RRC ID 1162
著者 Litter J, Keszthelyi A, Hamari Z, Pfeiffer I, Kucsera J.
タイトル Differences in mitochondrial genome organization of Cryptococcus neoformans strains.
ジャーナル Antonie Van Leeuwenhoek
Abstract The organization of the mitochondrial genomes in two strains belonging in different varieties of Cryptococcus neoformans was analysed. Physical maps of the mtDNA of the IFM5844 (var. neoformans) and IFO410 (var. grubii) strains were constructed by using EcoRI and EcoRV restriction enzymes; functional maps were constructed by hybridization, cloning and sequencing. Most of the genes important in the mitochondrial function (ND1, ND2, ND3, ND4, ND4L, ND5, ND6, ATP6, ATP9, COX1, COX2 and COB) and protein synthesis (SsrRNA and LsrRNA) were localized. We did not find any differences between the strains in the order of these genes. However, they differed significantly in the sizes of the mtDNAs: 32.6 kb for IFM5844, and 24.1 kb for IFO410. This can be attributed to two large regions of the mtDNA. In these regions, differences were found in the numbers of introns in COX1 (no intron in var. grubii, 5 introns in var. neoformans), COB (1 intron in var. grubii, 2 introns in var. neoformans), LsrRNA (no intron in var. grubii, 2 introns in var. neoformans), and ND5 (no intron in var. grubii, 1 intron in var. neoformans) genes. In several introns of the COB and COX1 genes LAGLIDADG motifs were found. Differences were also observed in the nucleotide sequences of some genes and in the sizes and sequences of intergenic regions. The nucleotide sequences of the genes of the IFM and IFO strains were compared with those of the H-99 and JEC 21 strains from the database. Surprisingly high similarities were found between the strains belonging in var. grubii (IFO 410 and H-99) and var. neoformans (IFM 5844 and JEC 21).
巻・号 88(3-4)
ページ 249-55
公開日 2005-1-1
DOI 10.1007/s10482-005-8544-x
PMID 16284931
MeSH Cloning, Molecular Cryptococcus neoformans / genetics* DNA, Fungal / genetics DNA, Intergenic DNA, Mitochondrial / genetics* Deoxyribonuclease EcoRI / metabolism Deoxyribonucleases, Type II Site-Specific / metabolism Gene Order Genes, Fungal* Introns Mitochondria / genetics* Molecular Sequence Data Nucleic Acid Hybridization Polymorphism, Genetic* Restriction Mapping Sequence Analysis, DNA
IF 2.674
引用数 23
WOS 分野 MICROBIOLOGY
リソース情報
病原微生物 IFM 5844