Reference - Detail
| RRC ID | 15654 |
|---|---|
| Author | Pungrasmi W, Lee HS, Yokota A, Ohta A. |
| Title | Pseudomonas japonica sp. nov., a novel species that assimilates straight chain alkylphenols. |
| Journal | J Gen Appl Microbiol |
| Abstract |
A bacterial strain, WL(T), which was isolated from an activated sludge, was able to degrade alkylphenols. 16S rDNA sequence analysis indicated that strain WL(T) belonged to the genus Pseudomonas (sensu stricto) and formed a monophyletic clade with the type strain of Pseudomonas graminis and other members in the Pseudomonas putida subcluster with sequence similarity values higher than 97%. Genomic relatedness based on DNA-DNA hybridization of strain WL(T) to these strains is 2-41%. Strain WL(T) contained ubiquinone-9 as the main respiratory quinone, and the G+C content of DNA was 66 mol%. The organism contained hexadecanoic acid (16:0), hexadecenoic acid (16:1) and octadecenoic acid (18:1) as major cellular fatty acids. The hydroxy fatty acids detected were 3-hydroxydecanoic acid (3-OH 10:0), 3-hydroxydodecanoic acid (3-OH 12:0) and 2-hydroxydodecanoic acid (2-OH 12:0). These results, as well as physiological and biochemical characteristics clearly indicate that the strain WL(T) represents a new Pseudomonas species, for which the name Pseudomonas japonica is proposed. The type strain is strain WL(T) (=IAM 15071T=TISTR 1526T). |
| Volume | 54(1) |
| Pages | 61-9 |
| Published | 2008-2-1 |
| DOI | 10.2323/jgam.54.61 |
| PII | JST.JSTAGE/jgam/54.61 |
| PMID | 18323682 |
| MeSH | Bacterial Typing Techniques Base Composition Fatty Acids / analysis Genotype Molecular Sequence Data Nucleic Acid Hybridization Phenols / chemistry* Phenols / metabolism* Phenotype Phylogeny Pseudomonas / classification* Pseudomonas / genetics Pseudomonas / isolation & purification Pseudomonas / physiology RNA, Ribosomal, 16S / genetics Sequence Analysis, DNA Sewage / microbiology* Species Specificity Tokyo |
| IF | 1.442 |
| Times Cited | 15 |
| WOS Category | BIOTECHNOLOGY & APPLIED MICROBIOLOGY MICROBIOLOGY |
| Altmetric score |
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| The most frequently cited source | Patent(IFI CLAIMS) |
| Total number of mentions | 2 |
| Altmetric score changes over past 6months | 0.0 |
| Resource | |
| General Microbes | JCM 11244 JCM 11246 |