RRC ID 21388
Author Jin L, Kim KK, Lee HG, Ahn CY, Oh HM.
Title Kaistia defluvii sp. nov., isolated from river sediment.
Journal Int J Syst Evol Microbiol
Abstract A Gram-stain-negative, aerobic, non-motile, rod- and coccus-shaped bacterium, designated strain B6-12(T), was isolated from sediment collected from the River Geumho in South Korea. In comparative 16S rRNA gene sequence analysis, the novel strain appeared to be affiliated with the class Alphaproteobacteria and to be most closely related to Kaistia adipata KCTC 12095(T), Kaistia dalseonensis DSM 18800(T), Kaistia geumhonensis DSM 18799(T), Kaistia granuli KCTC 12575(T), Kaistia soli KACC 12605(T) and Kaistia terrae KACC 12910(T), with sequence similarities of 96.2-99.1%. The predominant ubiquinone in the isolate was Q-10, major fatty acids were C(18:0), C(18:1)ω7c and C(19:0)ω8c cyclo, and genomic DNA G+C content was 63.0 mol%. Based on the phylogenetic and chemotaxonomic evidence and the results of DNA-DNA hybridizations, strain B6-12(T) represents a novel species in the genus Kaistia, for which the name Kaistia defluvii sp. nov. is proposed. The type strain is B6-12(T) ( = KCTC 23766(T)  = JCM 18034(T)).
Volume 62(Pt 12)
Pages 2878-2882
Published 2012-12-1
DOI 10.1099/ijs.0.038687-0
PMID 22247212
MeSH Bacterial Typing Techniques Base Composition DNA, Bacterial / genetics Fatty Acids / analysis Geologic Sediments / microbiology* Molecular Sequence Data Nucleic Acid Hybridization Phylogeny* RNA, Ribosomal, 16S / genetics Republic of Korea Rhizobiaceae / classification* Rhizobiaceae / genetics Rhizobiaceae / isolation & purification Rivers / microbiology* Sequence Analysis, DNA Sewage / microbiology Ubiquinone / analogs & derivatives Ubiquinone / analysis
IF 2.415
Times Cited 4
WOS Category MICROBIOLOGY
Resource
General Microbes JCM 18034