RRC ID 27464
著者 Zhang DF, Chen W, He J, Zhang XM, Xiong ZJ, Sahu MK, Sivakumar K, Li WJ.
タイトル Saccharomonospora oceani sp. nov. isolated from marine sediments in Little Andaman, India.
ジャーナル Antonie Van Leeuwenhoek
Abstract Two actinomycete strains, designated YIM M11168(T) and YIM M11177, were isolated from marine sediment samples from Little Andaman, Indian Ocean, and their taxonomic position was determined by a polyphasic approach. The two Gram-positive, aerobic strains were observed to produce branched substrate mycelium and aerial hyphae but did not fragment, and no diffusible pigment was produced on the media tested. At maturity, spores were formed singly or in pairs on aerial hyphae and substrate mycelium, and occasionally the single ones were borne on long sporophores. The optimum growth was determined to occur at 28 °C, 0-4 % (w/v) NaCl and pH 7.0-8.0. Whole-cell hydrolysates of both strains contained meso-diaminopimelic acid and the diagnostic sugars were determined to be galactose, glucose and arabinose. Their predominant menaquinone was found to be MK-9(H4). The polar lipids detected in the two strains were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylinositol mannoside, phosphatidylinositol, phosphatidylmethylethanolamine, phosphatidylethanolamine and two unknown phosphoglycolipids. The major fatty acids (>10 %) identified were iso-C16:0, iso-C16:1 H, iso-C16:0, C17:1 ω6c for strain YIM M11168(T), iso-C16:0 and Summed Feature 3 for strain YIM M11177. The G + C contents of the genomic DNAs of both strains were determined to be 71.4 %. DNA-DNA hybridization relatedness values (78.4 ± 3.7 %) of these two isolates supported the conclusion that they belong to the same species. Based on phylogenetic analysis, phenotypic and genotypic data, it is concluded that the two isolates belong to a novel species of the genus Saccharomonospora of the family Pseudonocardiaceae. The name Saccharomonospora oceani sp. nov. (Type strain YIM M11168(T) = DSM 45700(T) = JCM 18128(T)) is proposed for the novel species.
巻・号 103(6)
ページ 1377-84
公開日 2013-6-1
DOI 10.1007/s10482-013-9918-0
PMID 23549906
MeSH Actinomycetales / classification* Actinomycetales / genetics Actinomycetales / isolation & purification* Actinomycetales / physiology Bacterial Typing Techniques Base Composition Base Sequence DNA, Bacterial / genetics Diaminopimelic Acid Fatty Acids Genes, rRNA Geologic Sediments / microbiology* India Indian Ocean Molecular Sequence Data Phylogeny RNA, Ribosomal, 16S / genetics Sequence Analysis, DNA Soil Microbiology Spores, Bacterial Vitamin K 2 / analysis
IF 2.674
引用数 4
WOS 分野 MICROBIOLOGY
リソース情報
一般微生物 JCM 18128