RRC ID 27688
Author Zhang J, Wang Y, Zhou S, Wu C, He J, Li F.
Title Comamonas guangdongensis sp. nov., isolated from subterranean forest sediment, and emended description of the genus Comamonas.
Journal Int J Syst Evol Microbiol
Abstract A facultatively anaerobic bacterium, strain CY01(T), isolated from subterranean forest sediment collected from Guangdong Province, China, was investigated using a polyphasic taxonomic approach. The cells were short rods, Gram-negative, non-sporulating and motile. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain CY01(T) showed highest sequence similarities to Comamonas thiooxydans S23(T) (98.0 %), Comamonas testosteroni JCM 5832(T) (97.9 %), Comamonas koreensis KCTC 12005(T) (97.7 %) and Comamonas odontotermitis LMG 23579(T) (97.0 %). The major respiratory quinone was ubiquinone-8. The major cellular fatty acids were summed feature 3 (C16 : 1ω6c and/or C16 : 1ω7c), C16 : 0 and summed feature 8 (C18 : 1ω6c and/or C18 : 1ω7c). Based on the phylogenetic analysis, DNA-DNA hybridization, whole-cell fatty acid composition as well as biochemical characteristics, strain CY01(T) was clearly distinguishable from all recognized species of the genus Comamonas and should be classified as a representative of a novel species of the genus, for which the name Comamonas guangdongensis sp. nov. is proposed. The type strain is CY01(T) ( = CCTCC AB 2011133(T) = KACC 16241(T)).
Volume 63(Pt 3)
Pages 809-814
Published 2013-3-1
DOI 10.1099/ijs.0.040188-0
PMID 22581903
MeSH Bacterial Typing Techniques Base Composition China Comamonas / classification* Comamonas / genetics Comamonas / isolation & purification DNA, Bacterial / genetics Fatty Acids / analysis Molecular Sequence Data Nucleic Acid Hybridization Phylogeny* RNA, Ribosomal, 16S / genetics Sequence Analysis, DNA Soil Microbiology* Trees / microbiology Ubiquinone / analysis
IF 2.415
Times Cited 12
WOS Category MICROBIOLOGY
Resource
General Microbes JCM 5832