RRC ID 31900
著者 Wang L, Yokoyama K, Miyaji M, Nishimura K.
タイトル Identification, classification, and phylogeny of the pathogenic species Exophiala jeanselmei and related species by mitochondrial cytochrome b gene analysis.
ジャーナル J Clin Microbiol
Abstract We analyzed a 402-bp sequence of the mitochondrial cytochrome b gene of 34 strains of Exophiala jeanselmei and 16 strains representing 12 related species. The strains of E. jeanselmei were classified into 20 DNA types and 17 amino acid types. The differences between these strains were found in 1 to 60 nucleotides and 1 to 17 amino acids. On the basis of the identities and similarities of nucleotide and amino acid sequences, some strains were reidentified: i.e., two strains of E. jeanselmei var. hetermorpha and one strain of E. castellanii as E. dermatitidis (including the type strain), three strains of E. jeanselmei as E. jeanselmei var. lecanii-corni (including the type strain), three strains of E. jeanselmei as E. bergeri (including the type strain), seven strains of E. jeanselmei as E. pisciphila (including the type strain), seven strains of E. jeanselmei as E. jeanselmei var. jeanselmei (including the type strain), one strain of E. jeanselmei as Fonsecaea pedrosoi (including the type strain), and one strain of E. jeanselmei as E. spinifera (including the type strain). Some E. jeanselmei strains showed distinct nucleotide and amino acid sequences. The amino-acid-based UPGMA (unweighted pair group method with the arithmetic mean) tree exhibited nearly the same topology as those of the DNA-based trees obtained by neighbor joining, maximum parsimony, and maximum likelihood methods.
巻・号 39(12)
ページ 4462-7
公開日 2001-12-1
DOI 10.1128/JCM.39.12.4462-4467.2001
PMID 11724862
PMC PMC88566
MeSH Cytochrome b Group / genetics* Cytochrome b Group / metabolism DNA, Bacterial / analysis Exophiala / classification* Exophiala / enzymology Exophiala / genetics Exophiala / pathogenicity Humans Mitochondria / enzymology* Molecular Sequence Data Mycoses / microbiology* Phylogeny* Polymerase Chain Reaction Sequence Analysis, DNA
IF 5.897
引用数 16
WOS 分野 MICROBIOLOGY
リソース情報
病原微生物 IFM 4823 IFM 4827 IFM 4852 IFM 4853 IFM 4855 IFM 4856 IFM 4857 IFM 4858 IFM 4859 IFM 4860 IFM 4861 IFM 4863 IFM 4865 IFM 4867 IFM 4874 IFM 4876 IFM 4877 IFM 4879 IFM 4882 IFM 4883 IFM 4887 IFM 4889 IFM 4970 IFM 4971 IFM 4973 IFM 4975 IFM 4976 IFM 4978 IFM 4981 IFM 4982 IFM 4983 IFM 4996 IFM 5393 IFM 5394 IFM 40919 IFM 40920 IFM 40921 IFM 41053 IFM 41478 IFM 41493 IFM 41494 IFM 41500 IFM 41704 IFM 41931 IFM 47649 IFM 47651 IFM 47653 IFM 47654 IFM 47656 IFM 48159