RRC ID 34388
Author Zhao J, Guo L, He H, Liu C, Zhang Y, Li C, Wang X, Xiang W.
Title Micromonospora taraxaci sp. nov., a novel endophytic actinomycete isolated from dandelion root (Taraxacum mongolicum Hand.-Mazz.).
Journal Antonie Van Leeuwenhoek
Abstract A novel actinomycete, designated strain NEAU-P5(T), was isolated from dandelion root (Taraxacum mongolicum Hand.-Mazz.). Strain NEAU-P5(T) showed closest 16S rRNA gene sequence similarity to Micromonospora chokoriensis 2-19/6(T) (99.5%), and phylogenetically clustered with Micromonospora violae NEAU-zh8(T) (99.3%), M. saelicesensis Lupac 09(T) (99.0%), M. lupini Lupac 14N(T) (98.8%), M. zeae NEAU-gq9(T) (98.4%), M. jinlongensis NEAU-GRX11(T) (98.3%) and M. zamorensis CR38(T) (97.9%). Phylogenetic analysis based on the gyrB gene sequence also indicated that the isolate clustered with the above type strains except M. violae NEAU-zh8(T). The cell-wall peptidoglycan consisted of meso-diaminopimelic acid and glycine. The major menaquinones were MK-9(H8), MK-9(H6) and MK-10(H2). The phospholipid profile contained diphosphatidylglycerol, phosphatidylethanolamine and phosphatidylinositol. The major fatty acids were C(16:0), iso-C(15:0) and C(17:0). Furthermore, some physiological and biochemical properties and low DNA-DNA relatedness values enabled the strain to be differentiated from members of closely related species. Therefore, it is proposed that strain NEAU-P5(T) represents a novel species of the genus Micromonospora, for which the name Micromonospora taraxaci sp. nov. is proposed. The type strain is NEAU-P5(T) (=CGMCC 4.7098(T) = DSM 45885(T)).
Volume 106(4)
Pages 667-74
Published 2014-10-1
DOI 10.1007/s10482-014-0237-x
PMID 25082023
MeSH Bacterial Typing Techniques Cell Wall / chemistry Cluster Analysis Cytosol / chemistry DNA Gyrase / genetics DNA, Bacterial / chemistry DNA, Bacterial / genetics DNA, Ribosomal / chemistry DNA, Ribosomal / genetics Diaminopimelic Acid / analysis Endophytes / classification* Endophytes / genetics Endophytes / isolation & purification* Endophytes / physiology Fatty Acids / analysis Micromonospora / classification* Micromonospora / genetics Micromonospora / isolation & purification* Micromonospora / physiology Molecular Sequence Data Nucleic Acid Hybridization Peptidoglycan / analysis Phospholipids / analysis Phylogeny Plant Roots / microbiology* RNA, Ribosomal, 16S / genetics Sequence Analysis, DNA Taraxacum / microbiology* Vitamin K 2 / analysis
IF 2.674
Times Cited 9
WOS Category MICROBIOLOGY
Resource
General Microbes JCM 13247 JCM 16031 JCM 16032