RRC ID 37131
著者 Shimura Y, Hirose Y, Misawa N, Osana Y, Katoh H, Yamaguchi H, Kawachi M.
タイトル Comparison of the terrestrial cyanobacterium Leptolyngbya sp. NIES-2104 and the freshwater Leptolyngbya boryana PCC 6306 genomes.
ジャーナル DNA Res
Abstract The cyanobacterial genus Leptolyngbya is widely distributed throughout terrestrial environments and freshwater. Because environmental factors, such as oxygen level, available water content, and light intensity, vary between soil surface and water bodies, terrestrial Leptolyngbya should have genomic differences with freshwater species to adapt to a land habitat. To study the genomic features of Leptolyngbya species, we determined the complete genome sequence of the terrestrial strain Leptolyngbya sp. NIES-2104 and compared it with that of the near-complete sequence of the freshwater Leptolyngbya boryana PCC 6306. The greatest differences between these two strains were the presence or absence of a nitrogen fixation gene cluster for anaerobic nitrogen fixation and several genes for tetrapyrrole synthesis, which can operate under micro-oxic conditions. These differences might reflect differences in oxygen levels where these strains live. Both strains have the genes for trehalose biosynthesis, but only Leptolyngbya sp. NIES-2104 has genetic capacity to produce a mycosporine-like amino acid, mycosporine-glycine. Mycosporine-glycine has an antioxidant action, which may contribute to adaptation to terrestrial conditions. These features of the genomes yielded additional insights into the classification and physiological characteristics of these strains.
巻・号 22(6)
ページ 403-12
公開日 2015-12-1
DOI 10.1093/dnares/dsv022
PII dsv022
PMID 26494835
PMC PMC4675709
MeSH Cyanobacteria / classification Cyanobacteria / genetics* Fresh Water / microbiology* Genome, Bacterial* Nitrogen Fixation / genetics Phylogeny Trehalose / genetics
IF 4.009
引用数 18
WOS 分野 GENETICS & HEREDITY
リソース情報
藻類 NIES-2104