RRC ID 40917
著者 Lin SY, Hameed A, Wen CZ, Liu YC, Hsu YH, Lai WA, Young CC.
タイトル Lysobacter lycopersici sp. nov., isolated from tomato plant Solanum lycopersicum.
ジャーナル Antonie Van Leeuwenhoek
Abstract A Gram-stain negative, aerobic, rod-shaped and non-spore-forming bacterium, CC-Bw-6(T) was isolated from chopped tomato stems. Analysis of the 16S rRNA gene sequence of the strain CC-Bw-6(T) showed its affiliation with the genus Lysobacter within the class Gammaproteobacteria. Strain CC-Bw-6(T) was found to be most closely related to Lysobacter panaciterrae KCTC 12601(T) (97.0%) and Lysobacter daecheongensis KCTC 12600(T) (96.8%), and showed lower similarity (<96.5%) to other Lysobacter species. DNA-DNA relatedness between strain CC-Bw-6(T) and L. panaciterrae KCTC 12601(T) was 10.8%, the G+C content of the genomic DNA is 69.9 mol%. Strain CC-Bw-6(T) was determined to possess C(11:0) iso, C(11:0) iso 3OH, C(14:0) iso, C(15:0) anteiso, C(15:1) ω5c, C(16:1) ω5c, C(16:0), C(15:0) iso, C(16:0) iso, C(17:0) iso and C(16:0) 10-methyl/C(17:1) iso ω9c as predominant fatty acids. The major polar lipid profile consists of phosphatidylethanolamine, phosphatidylglycerol, diphosphatidylglycerol and unidentified phospholipids. The predominant polyamine is spermidine, and ubiquinone-8 is the predominant respiratory quinone. Analysis of phenotypic, geno- and phylogenetic characteristics revealed a distinct taxonomic position of strain CC-Bw-6(T) with respect to other Lysobacter species. Based on the phylogenetic, chemotaxonomic and phenotypic data presented here, we propose a novel species with the name Lysobacter lycopersici sp. nov. The type strain is CC-Bw-6(T) (=BCRC 80612(T) = JCM 19164(T)).
巻・号 107(5)
ページ 1261-70
公開日 2015-5-1
DOI 10.1007/s10482-015-0419-1
PMID 25750064
MeSH Bacterial Typing Techniques Base Composition DNA, Bacterial / genetics Fatty Acids / chemistry Fatty Acids / metabolism Lysobacter / classification* Lysobacter / genetics Lysobacter / isolation & purification* Lysobacter / metabolism Molecular Sequence Data Phylogeny RNA, Ribosomal, 16S / genetics Solanum lycopersicum / microbiology*
IF 2.674
引用数 8
WOS 分野 MICROBIOLOGY
リソース情報
一般微生物 JCM 19164