Reference - Detail
| RRC ID | 50343 |
|---|---|
| Author | Staals RHJ, Agari Y, Maki-Yonekura S, Zhu Y, Taylor DW, van Duijn E, Barendregt A, Vlot M, Koehorst JJ, Sakamoto K, Masuda A, Dohmae N, Schaap PJ, Doudna JA, Heck AJR, Yonekura K, van der Oost J, Shinkai A. |
| Title | Structure and activity of the RNA-targeting Type III-B CRISPR-Cas complex of Thermus thermophilus. |
| Journal | Mol Cell |
| Abstract |
The CRISPR-Cas system is a prokaryotic host defense system against genetic elements. The Type III-B CRISPR-Cas system of the bacterium Thermus thermophilus, the TtCmr complex, is composed of six different protein subunits (Cmr1-6) and one crRNA with a stoichiometry of Cmr112131445361:crRNA1. The TtCmr complex copurifies with crRNA species of 40 and 46 nt, originating from a distinct subset of CRISPR loci and spacers. The TtCmr complex cleaves the target RNA at multiple sites with 6 nt intervals via a 5' ruler mechanism. Electron microscopy revealed that the structure of TtCmr resembles a "sea worm" and is composed of a Cmr2-3 heterodimer "tail," a helical backbone of Cmr4 subunits capped by Cmr5 subunits, and a curled "head" containing Cmr1 and Cmr6. Despite having a backbone of only four Cmr4 subunits and being both longer and narrower, the overall architecture of TtCmr resembles that of Type I Cascade complexes. |
| Volume | 52(1) |
| Pages | 135-145 |
| Published | 2013-10-10 |
| DOI | 10.1016/j.molcel.2013.09.013 |
| PMID | 24119403 |
| PMC | PMC4006948 |
| MeSH | Bacterial Proteins / chemistry Bacterial Proteins / genetics Bacterial Proteins / metabolism* CRISPR-Associated Proteins / chemistry CRISPR-Associated Proteins / genetics CRISPR-Associated Proteins / metabolism* Clustered Regularly Interspaced Short Palindromic Repeats High-Throughput Nucleotide Sequencing Microscopy, Electron Models, Molecular Protein Conformation Protein Subunits RNA, Bacterial / chemistry RNA, Bacterial / genetics RNA, Bacterial / metabolism* Ribonucleases / chemistry Ribonucleases / genetics Ribonucleases / metabolism* Sequence Analysis, RNA Spectrometry, Mass, Electrospray Ionization Structure-Activity Relationship Thermus thermophilus / genetics Thermus thermophilus / metabolism* |
| IF | 15.584 |
| Times Cited | 127 |
| Altmetric score |
オルトメトリクス指標項目
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| The most frequently cited source | Patent(IFI CLAIMS) |
| Total number of mentions | 34 |
| Altmetric score changes over past 6months | 0.0 |
| Resource | |
| DNA material | pUC-cmr6h (RDB15775) PC014162-42 (RDB15779). |