Reference - Detail
| RRC ID | 50853 |
|---|---|
| Author | Subhash Y, Yoon DE, Lee SS. |
| Title | Skermanella mucosa sp. nov., isolated from crude oil contaminated soil. |
| Journal | Antonie Van Leeuwenhoek |
| Abstract |
A novel Gram-stain negative, small rod-shaped bacterium (strain 8-14-6T) was isolated from hydrocarbon contaminated desert soil collected from Kuwait. Strain 8-14-6T grew at 5-37 °C, pH 6.0-8.8 and 0-2% (w/v) of NaCl concentration. Casein, starch, Tween 20 and Tween 80 were hydrolyzed while urea, chitin, DNA and carboxymethyl-cellulose were not hydrolyzed by strain 8-14-6T. The major cellular fatty acids were identified as C18:1ω6c/C18:1ω7c, C16:0 and iso-C16:1I/C14:03-OH. Strain 8-14-6T produced diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, phosphatidylcholine, an unidentified phospholipids, two unidentified lipids and five unidentified amino lipids as polar lipids. Genomic G+C content was 73.5 mol %. 16S rRNA gene sequence comparisons indicated that strain 8-14-6T represents a member of the genus Skermanella within family Rhodospirillaceae of the class Alphaproteobacteria. Strain 8-14-6T has a sequence similarity of 98.9% with Skermanella rosea M1T, 97.4% with Skermanella aerolata 5416T-32T, 96.9% with Skermanella stibiiresistens SB22T and <95.4% with the other two known species of the genus Skermanella. The DNA-DNA relatedness values between strain 8-14-6T and the type strains of the closely related species were clearly below the 70% threshold. From the combination of phenotypic and genotypic characteristics and distinct phylogenetic position, the strain is considered to represent a novel species of the genus Skermanella, for which the name Skermanella mucosa sp. nov. is proposed. The type strain is 8-14-6T (=KEMB 2255-438T =JCM 31590T). |
| Volume | 110(8) |
| Pages | 1053-1060 |
| Published | 2017-8-1 |
| DOI | 10.1007/s10482-017-0878-7 |
| PII | 10.1007/s10482-017-0878-7 |
| PMID | 28501914 |
| MeSH | Bacteria / genetics Bacteria / isolation & purification* Bacterial Typing Techniques Base Composition DNA, Bacterial Fatty Acids Mucous Membrane Petroleum Phylogeny RNA, Ribosomal, 16S* Sequence Analysis, DNA Soil Soil Microbiology |
| IF | 2.674 |
| Times Cited | 5 |
| Altmetric score |
オルトメトリクス指標項目
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| The most frequently cited source | Patent(IFI CLAIMS) |
| Total number of mentions | 1 |
| Altmetric score changes over past 6months | 0.0 |
| Resource | |
| General Microbes | JCM 31590 |