RRC ID 5101
著者 Ying JY, Liu ZP, Wang BJ, Dai X, Yang SS, Liu SJ.
タイトル Salegentibacter catena sp. nov., isolated from sediment of the South China Sea, and emended description of the genus Salegentibacter.
ジャーナル Int J Syst Evol Microbiol
Abstract A novel marine bacterial strain, HY1T, was isolated from sediment of the South China Sea. The strain was aerobic and heterotrophic and formed saffron yellow-pigmented colonies on marine agar 2216. Cells were non-motile, Gram-negative rods, frequently occurring in chains. BLASTN searches revealed that the 16S rRNA gene sequence of strain HY1T showed high similarity with those of members of the genera Gillisia (91.7-93.8 %) and Salegentibacter (92.6-93.5 %). Phylogenetic analysis based on 16S rRNA gene sequences showed that the strain clustered with members of both Salegentibacter and Gillisia and phylogenetic trees constructed using three different methods (neighbour-joining, maximum-parsimony and minimum-evolution) indicated that strain HY1T clustered more frequently with members of the genus Salegentibacter. The DNA G+C content of strain HY1T was 44.4 mol% and its major cellular fatty acids (>or=5 % of the total fatty acids) were iso-15 : 1 (5.0 %), iso-15 : 0 (6.8 %), anteiso-15 : 0 (6.4 %), 15 : 0 (10.4 %), iso-16 : 0 (13.5 %), summed feature 3 (comprising iso-15 : 0 2-OH and/or 16 : 1omega7c; 6.3 %), iso-17 : 0 3-OH (5.2 %) and 17 : 0 2-OH (5.0 %). Cells contained menaquinone 6. Based on the phylogenetic and phenotypic analyses, strain HY1T should be classified as representing a novel species within the genus Salegentibacter, for which the name Salegentibacter catena sp. nov. is proposed. The type strain is HY1T (=CGMCC 1.6101T=JCM 14015T). Based on this study and on previously described Salegentibacter species, an emended description of the genus Salegentibacter is given.
巻・号 57(Pt 2)
ページ 219-222
公開日 2007-2-1
DOI 10.1099/ijs.0.64658-0
PMID 17267953
MeSH Aerobiosis Bacterial Typing Techniques Base Composition Base Sequence China DNA, Bacterial / chemistry DNA, Bacterial / genetics DNA, Ribosomal / chemistry DNA, Ribosomal / genetics Fatty Acids / analysis Fatty Acids / chemistry Flavobacteriaceae / classification* Flavobacteriaceae / cytology Flavobacteriaceae / isolation & purification* Flavobacteriaceae / physiology Genes, rRNA / genetics Geologic Sediments / microbiology* Locomotion Molecular Sequence Data Phylogeny Pigments, Biological / biosynthesis Quinones / analysis Quinones / chemistry RNA, Bacterial / genetics RNA, Ribosomal, 16S / genetics Seawater / microbiology* Sequence Analysis, DNA Sequence Homology, Nucleic Acid Water Microbiology
IF 2.415
引用数 23
WOS 分野 MICROBIOLOGY
リソース情報
一般微生物 JCM14015