RRC ID 5156
Author Wada J, Ando T, Kiyohara M, Ashida H, Kitaoka M, Yamaguchi M, Kumagai H, Katayama T, Yamamoto K.
Title Bifidobacterium bifidum lacto-N-biosidase, a critical enzyme for the degradation of human milk oligosaccharides with a type 1 structure.
Journal Appl Environ Microbiol
Abstract Breast-fed infants often have intestinal microbiota dominated by bifidobacteria in contrast to formula-fed infants. We found that several bifidobacterial strains produce a lacto-N-biosidase that liberates lacto-N-biose I (Galbeta1,3GlcNAc; type 1 chain) from lacto-N-tetraose (Galbeta1,3GlcNAcbeta1,3Galbeta1,4Glc), which is a major component of human milk oligosaccharides, and subsequently isolated the gene from Bifidobacterium bifidum JCM1254. The gene, designated lnbB, was predicted to encode a protein of 1,112 amino acid residues containing a signal peptide and a membrane anchor at the N and C termini, respectively, and to possess the domain of glycoside hydrolase family 20, carbohydrate binding module 32, and bacterial immunoglobulin-like domain 2, in that order, from the N terminus. The recombinant enzyme showed substrate preference for the unmodified beta-linked lacto-N-biose I structure. Lacto-N-biosidase activity was found in several bifidobacterial strains, but not in the other enteric bacteria, such as clostridia, bacteroides, and lactobacilli, under the tested conditions. These results, together with our recent finding of a novel metabolic pathway specific for lacto-N-biose I in bifidobacterial cells, suggest that some of the bifidobacterial strains are highly adapted for utilizing human milk oligosaccharides with a type 1 chain.
Volume 74(13)
Pages 3996-4004
Published 2008-7-1
DOI 10.1128/AEM.00149-08
PII AEM.00149-08
PMID 18469123
PMC PMC2446520
MeSH Amino Acid Sequence Bacterial Proteins / chemistry Bacterial Proteins / genetics Bacterial Proteins / metabolism Bifidobacterium / classification Bifidobacterium / enzymology* DNA, Bacterial / analysis DNA, Bacterial / isolation & purification Glycoside Hydrolases / chemistry Glycoside Hydrolases / genetics Glycoside Hydrolases / metabolism* Humans Mass Spectrometry / methods Milk, Human / chemistry Milk, Human / metabolism* Molecular Sequence Data Oligosaccharides / chemistry Oligosaccharides / metabolism* Recombinant Proteins / genetics Recombinant Proteins / metabolism Sequence Analysis, DNA Substrate Specificity
IF 4.016
Times Cited 136
WOS Category BIOTECHNOLOGY & APPLIED MICROBIOLOGY MICROBIOLOGY
Resource
General Microbes JCM1254