RRC ID |
5202
|
Author |
Liu R, Liu H, Zhang CX, Yang SY, Liu XH, Zhang KY, Lai R.
|
Title |
Sphingobacterium siyangense sp. nov., isolated from farm soil.
|
Journal |
Int J Syst Evol Microbiol
|
Abstract |
The taxonomic position of a novel Gram-negative strain, designated SY1(T), isolated from a farm-soil sample obtained from Jiangsu Province, PR China, was characterized by using a polyphasic approach. The cells were non-motile, non-spore-forming rods. The organism grew optimally at 30-37 degrees C and at pH 6.0-8.0. Based on 16S rRNA gene sequence analysis, strain SY1(T) is a member of the genus Sphingobacterium; Sphingobacterium multivorum JCM 21156(T) was the nearest relative (98.5 % sequence similarity). The predominant fatty acids of strain SY1(T) were iso-C(15 : 0) (32.9 %), C(16 : 0) (10.9 %) and summed feature 3 (iso-C(15 : 0) 2-OH and/or C(16 : 1)omega7c; 24.1 %). The DNA G+C content was 38.5 mol%. The low level of DNA-DNA relatedness (2.2 %) to S. multivorum JCM 21156(T) in combination with differential morphological and biochemical properties demonstrated that strain SY1(T) (=KCTC 22131(T)=CGMCC 1.6855(T)) should be classified as representing a novel species of the genus Sphingobacterium for which the name Sphingobacterium siyangense sp. nov. is proposed.
|
Volume |
58(Pt 6)
|
Pages |
1458-62
|
Published |
2008-6-1
|
DOI |
10.1099/ijs.0.65696-0
|
PII |
58/6/1458
|
PMID |
18523194
|
MeSH |
Agriculture*
Bacterial Typing Techniques
China
DNA, Bacterial / analysis
DNA, Ribosomal / analysis
Fatty Acids / analysis
Genes, rRNA
Molecular Sequence Data
Nucleic Acid Hybridization
Phenotype
Phylogeny
RNA, Ribosomal, 16S / genetics
Sequence Analysis, DNA
Soil Microbiology*
Species Specificity
Sphingobacterium / classification*
Sphingobacterium / genetics
Sphingobacterium / isolation & purification*
Sphingobacterium / physiology
|
IF |
2.415
|
Times Cited |
28
|
WOS Category
|
MICROBIOLOGY
|
Resource |
General Microbes |
JCM21156 |