RRC ID 5219
著者 Lai Q, Shao Z.
タイトル Pseudomonas xiamenensis sp. nov., a denitrifying bacterium isolated from activated sludge.
ジャーナル Int J Syst Evol Microbiol
Abstract A taxonomic study was carried out on strain C10-2T, a moderately halophilic denitrifier isolated from activated sludge samples collected in China. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain C10-2T belonged to the genus Pseudomonas, with highest sequence similarity of 98.1 and 97.7 % to 'Pseudomonas denitrificans' IAM 12023 and Pseudomonas pertucinogena JCM 11590T, respectively. The gyrB, rpoD and rpoB gene sequence similarity between strain C10-2T and P. pertucinogena JCM 11590T was respectively 84.1, 79.0 and 88.2 %. Phylogenetic trees based on these housekeeping genes showed that strain C10-2T and P. pertucinogena JCM 11590T form a clade at the periphery of the genus Pseudomonas. The DNA-DNA hybridization value between strain C10-2T and P. pertucinogena JCM 11590T was 30-32 %. The G+C content of the chromosomal DNA was 61.2 mol%. The combined genotypic and phenotypic data show that strain C10-2T represents a novel species of the genus Pseudomonas, for which the name Pseudomonas xiamenensis sp. nov. is proposed, with the type strain C10-2T (=CGMCC 1.6446 =JCM 13530T =MCCC 1A00089T).
巻・号 58(Pt 8)
ページ 1911-5
公開日 2008-8-1
DOI 10.1099/ijs.0.65459-0
PII 58/8/1911
PMID 18676479
MeSH Bacterial Proteins / genetics Bacterial Typing Techniques Base Composition China DNA, Bacterial / analysis DNA, Ribosomal / analysis Genes, rRNA Molecular Sequence Data Nitrates / metabolism* Nucleic Acid Hybridization Phenotype Phylogeny Pseudomonas / classification* Pseudomonas / genetics Pseudomonas / isolation & purification Pseudomonas / physiology RNA, Ribosomal, 16S / genetics Sequence Analysis, DNA Sewage / microbiology* Species Specificity
IF 2.415
引用数 22
WOS 分野 MICROBIOLOGY
リソース情報
一般微生物 JCM11590 JCM13530