| RRC ID |
52821
|
| Author |
Navarro-Retamal C, Bremer A, Alzate-Morales J, Caballero J, Hincha DK, González W, Thalhammer A.
|
| Title |
Molecular dynamics simulations and CD spectroscopy reveal hydration-induced unfolding of the intrinsically disordered LEA proteins COR15A and COR15B from Arabidopsis thaliana.
|
| Journal |
Phys Chem Chem Phys
|
| Abstract |
The LEA (late embryogenesis abundant) proteins COR15A and COR15B from Arabidopsis thaliana are intrinsically disordered under fully hydrated conditions, but obtain α-helical structure during dehydration, which is reversible upon rehydration. To understand this unusual structural transition, both proteins were investigated by circular dichroism (CD) and molecular dynamics (MD) approaches. MD simulations showed unfolding of the proteins in water, in agreement with CD data obtained with both HIS-tagged and untagged recombinant proteins. Mainly intramolecular hydrogen bonds (H-bonds) formed by the protein backbone were replaced by H-bonds with water molecules. As COR15 proteins function in vivo as protectants in leaves partially dehydrated by freezing, unfolding was further assessed under crowded conditions. Glycerol reduced (40%) or prevented (100%) unfolding during MD simulations, in agreement with CD spectroscopy results. H-bonding analysis indicated that preferential exclusion of glycerol from the protein backbone increased stability of the folded state.
|
| Volume |
18(37)
|
| Pages |
25806-16
|
| Published |
2016-10-7
|
| DOI |
10.1039/c6cp02272c
|
| PMID |
27255148
|
| MeSH |
Amino Acid Sequence
Arabidopsis / chemistry*
Arabidopsis Proteins / chemistry*
Circular Dichroism
Hydrogen Bonding
Molecular Dynamics Simulation
Plant Extracts / chemistry
Plant Leaves / chemistry
Protein Structure, Secondary
Protein Unfolding
|
| IF |
3.43
|
| Times Cited |
15
|
| Resource |
| Arabidopsis / Cultured plant cells, genes |
pda02804
pda06312 |
