RRC ID 55111
著者 Taguchi AT, Ohmori D, Dikanov SA, Iwasaki T.
タイトル g-Tensor Directions in the Protein Structural Frame of Hyperthermophilic Archaeal Reduced Rieske-Type Ferredoxin Explored by 13C Pulsed Electron Paramagnetic Resonance.
ジャーナル Biochemistry
Abstract Interpretation of magnetic resonance data in the context of structural and chemical biology requires prior knowledge of the g-tensor directions for paramagnetic metallo-cofactors with respect to the protein structural frame. Access to this information is often limited by the strict requirement of suitable protein crystals for single-crystal electron paramagnetic resonance (EPR) measurements or the reliance on protons (with ambiguous locations in crystal structures) near the paramagnetic metal site. Here we develop a novel pulsed EPR approach with selective 13Cβ-cysteine labeling of model [2Fe-2S] proteins to help bypass these problems. Analysis of the 13Cβ-cysteine hyperfine tensors reproduces the g-tensor of the Pseudomonas putida ISC-like [2Fe-2S] ferredoxin (FdxB). Its application to the hyperthermophilic archaeal Rieske-type [2Fe-2S] ferredoxin (ARF) from Sulfolobus solfataricus, for which the single-crystal EPR approach was not feasible, supports the best-fit g x-, g z-, and g y-tensor directions of the reduced cluster as nearly along Fe-Fe, S-S, and the cluster plane normal, respectively. These approximate principal directions of the reduced ARF g-tensor, explored by 13C pulsed EPR, are less skewed from the cluster molecular axes and are largely consistent with those previously determined by single-crystal EPR for the cytochrome bc1-associated, reduced Rieske [2Fe-2S] center. This suggests the approximate g-tensor directions are conserved across the phylogenetically and functionally divergent Rieske-type [2Fe-2S] proteins.
巻・号 57(28)
ページ 4074-4082
公開日 2018-7-17
DOI 10.1021/acs.biochem.8b00438
PMID 29890072
MeSH Archaeal Proteins / chemistry* Bacterial Proteins / chemistry Carbon Isotopes / analysis Crystallography, X-Ray Cysteine / analysis Electron Spin Resonance Spectroscopy / methods* Ferredoxins / chemistry* Iron-Sulfur Proteins / chemistry Models, Molecular Protein Conformation Pseudomonas putida / chemistry Sulfolobus solfataricus / chemistry*
IF 2.952
引用数 0
リソース情報
一般微生物 JCM 20004