RRC ID 5520
Author Kim KH, Roh SW, Chang HW, Nam YD, Yoon JH, Jeon CO, Oh HM, Bae JW.
Title Pseudomonas sabulinigri sp. nov., isolated from black beach sand.
Journal Int J Syst Evol Microbiol
Abstract A novel Gram-negative, aerobic, motile, short rod-shaped bacterium, designated J64T, was isolated from black sand collected from Soesoggak, Jeju Island, Korea. Cells grew at 4-37 degrees C, at pH 5.5-10.0 and with 0-10 % NaCl. The strain was found to be oxidase- and catalase-positive. Phylogenetic analyses showed that strain J64T belongs to the genus Pseudomonas, forming a monophyletic group with Pseudomonas pachastrellae, Pseudomonas pertucinogena and 'Pseudomonas denitrificans'. The 16S rRNA gene sequence similarity between strain J64T and type strains of all Pseudomonas species with validly published names was below 96.6 %. Low levels of DNA-DNA relatedness were found with respect to type strains of P. pachastrellae and P. pertucinogena, supporting the classification of strain J64T within a novel species of the genus Pseudomonas. Strain J64T contained C(18 : 1)omega7c (37.2 %), C(16 : 0) (20.4 %), summed feature 3 (17.4 %; comprising iso-C(15 : 0) 2-OH and/or C(16 : 1)omega7c) and C(12 : 0) (7.6 %) as major cellular fatty acids. On the basis of the phenotypic and phylogenetic data, strain J64T represents a novel species of the genus Pseudomonas, for which the name Pseudomonas sabulinigri sp. nov. is proposed. The type strain is J64T (=KCTC 22137T =JCM 14963T).
Volume 59(Pt 1)
Pages 38-41
Published 2009-1-1
DOI 10.1099/ijs.0.65866-0
PII 59/1/38
PMID 19126720
MeSH Bacterial Typing Techniques DNA, Bacterial / analysis DNA, Ribosomal / analysis Genes, rRNA Geologic Sediments / microbiology* Korea Nucleic Acid Hybridization Phenotype Phylogeny Pseudomonas / classification* Pseudomonas / genetics Pseudomonas / isolation & purification* Pseudomonas / physiology RNA, Ribosomal, 16S / genetics Seawater / microbiology* Sequence Analysis, DNA Silicon Dioxide* Species Specificity
IF 2.415
Times Cited 18
WOS Category MICROBIOLOGY
Resource
General Microbes JCM14963