RRC ID 60225
著者 Wang Y, Cao P, Sun P, Zhao J, Sun X, Zhang J, Li C, Xiang W, Wang X.
タイトル Cryobacterium tepidiphilum sp. nov., isolated from rhizosphere soil of lettuce (var. ramosa Hort.).
ジャーナル Antonie Van Leeuwenhoek
Abstract A Gram-stain positive, aerobic, rod-shaped bacterium, designated strain NEAU-85T, was isolated from rhizosphere soil of lettuce and characterised using a polyphasic approach. Strain NEAU-85T was found to be catalase positive, motile and able to grow at between 10 and 30 °C. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain NEAU-85T belongs to the genus Cryobacterium and is closely related to the type strain Cryobacterium psychrotolerans JCM 13925T (98.5%) and also to Leifsonia kafniensis NCCB 100216T (97.6%). Multilocus sequence analysis using the concatenated gene sequences of the atpD, dnaK, recA, rpoB, sevY and ychF genes showed that strain NEAU-85T belongs to the genus Cryobacterium. The digital DNA-DNA hybridization values revealed that strain NEAU-85T is distinct from its close phylogenetic neighbour C. psychrotolerans. The menaquinones were identified as MK-10 and MK-11. The phospholipid profile was found to consist of diphosphatidylglycerol, phosphatidylglycerol, phospholipid, an unidentified glycolipid and an unidentified lipid. The major fatty acids were identified as anteiso-C15:0, anteiso-C15:1 and iso-C16:0. The genomic DNA G + C content of strain NEAU-85T was determined to be 68.9 mol%. The DNA-DNA hybridization value between them was less than 70%. On the basis of phenotypic, genotypic and phylogenetic data, strain NEAU-85T can be concluded to represent a novel species of the genus Cryobacterium, for which the name Cryobacterium tepidiphilum sp. nov. is proposed. The type strain is NEAU-85T (= CCTCC AA 2018035T = JCM 32545T).
巻・号 112(11)
ページ 1611-1621
公開日 2019-11-1
DOI 10.1007/s10482-019-01287-3
PII 10.1007/s10482-019-01287-3
PMID 31222464
MeSH Actinobacteria / chemistry Actinobacteria / classification* Actinobacteria / genetics Actinobacteria / isolation & purification* Bacterial Typing Techniques Base Composition Genome, Bacterial Lettuce / microbiology* Multilocus Sequence Typing Phenotype Phylogeny RNA, Ribosomal, 16S / genetics Rhizosphere* Soil Microbiology*
IF 1.934
引用数 0
リソース情報
一般微生物 JCM13925 JCM32545