論文 - 詳細
| RRC ID | 66284 |
|---|---|
| 著者 | Fang BZ, Xie YG, Zhou XK, Zhang XT, Liu L, Jiao JY, Xiao M, Li WJ. |
| タイトル | Lysobacter prati sp. nov., isolated from a plateau meadow sample. |
| ジャーナル | Antonie Van Leeuwenhoek |
| Abstract |
A novel proteobacterial strain designated SYSU H10001T was isolated from a soil sample collected from plateau meadow in Hongyuan county, Sichuan province, south-western China. The taxonomic position of the strain was investigated using a polyphasic approach. On the basis of 16S rRNA gene sequence similarities and phylogenetic analysis, strain SYSU H10001T was most closely related to Lysobacter soli KCTC 22011T (98.6%, sequence similarity) and Lysobacter panacisoli JCM 19212T (98.2%). The prediction result of secondary metabolites based on genome shown that the strain SYSU H10001T contained 3 clusters of bacteriocins, 1 cluster of non-ribosomal peptide synthetase, 1 cluster of type 1 polyketide synthase and 1 cluster of arylpolyene. In addition, the major isoprenoid quinone was Q-8 and the major fatty acids were identified as iso-C15:0, iso-C17:0 and Summed feature 9. The polar lipids contained diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, and three unidentified phospholipids. The genomic DNA G + C content of strain SYSU H10001T was 66.5% (genome). On the basis of phenotypic, genotypic and phylogenetic data, strain SYSU H10001T represents a novel species of the genus Lysobacter, for which the name Lysobacter prati sp. nov. is proposed. The type strain is SYSU H10001T (= KCTC 72062T = CGMCC 1.16662T). |
| 巻・号 | 113(6) |
| ページ | 763-772 |
| 公開日 | 2020-6-1 |
| DOI | 10.1007/s10482-020-01386-6 |
| PII | 10.1007/s10482-020-01386-6 |
| PMID | 31980979 |
| MeSH | Anti-Bacterial Agents / biosynthesis Bacteriocins / biosynthesis Bacteriocins / genetics China Fatty Acids / analysis Genes, Bacterial Genome, Bacterial Grassland Lysobacter* / classification Lysobacter* / genetics Lysobacter* / isolation & purification Phylogeny RNA, Ribosomal, 16S / genetics Secondary Metabolism |
| オルトメトリクス指標 |
オルトメトリクス指標項目
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| 最多言及媒体 | X(Twitter) |
| 各媒体での言及数の合計 | 2 |
| 過去6か月間でのオルトメトリクス指標の変動値 | 0.0 |
| リソース情報 | |
| 一般微生物 | JCM19212 |