RRC ID 66515
Author Cha QQ, Ren XB, Sun YY, He XY, Su HN, Chen XL, Zhang YZ, Xie BB, Zhao LS, Song XY, Zhang XY.
Title Shewanella polaris sp. nov., a psychrotolerant bacterium isolated from Arctic brown algae.
Journal Int J Syst Evol Microbiol
Abstract A Gram-stain-negative, facultatively anaerobic, flagellated and rod-shaped bacterium, designated strain SM1901T, was isolated from a brown algal sample collected from Kings Bay, Svalbard, Arctic. Strain SM1901T grew at -4‒30 °C and with 0-7.0 % (w/v) NaCl. It reduced nitrate to nitrite and hydrolysed DNA and Tween 80. Results of phylogenetic analyses based on 16S rRNA gene sequences indicated that strain SM1901T was affiliated with the genus Shewanella, showing the highest sequence similarity to the type strain of Shewanella litoralis (97.5%), followed by those of Shewanella vesiculosa, Shewanella livingstonensis and Shewanella saliphila (97.3 % for all three). The major cellular fatty acids were summed feature 3 (C16 : 1ω7с and/or C16 : 1ω6с), C16 : 0, C18 : 0, iso-C15 : 0 and C17 : 1ω8с and the major polar lipids were phosphatidylethanolamine and phosphatidylglycerol. The respiratory quinones were ubiquinones Q-7, Q-8, menaquinones MK-7(H) and MK-8. The genome of strain SM1901T was 4648537 nucleotides long and encoded a variety of cold adaptation related genes, providing clues for better understanding the ecological adaptation mechanisms of polar bacteria. The genomic DNA G+C content of strain SM1901T was 40.5 mol%. Based on the polyphasic evidence presented in this paper, strain SM1901T was considered to represent a novel species, constituting a novel psychrotolerant lineage out of the known SF clade encompassed by polar Shewanella species, within the genus Shewanella, for which the name Shewanella polaris sp. nov. is proposed. The type strain is SM1901T (=KCTC 72047T=MCCC 1K03585T).
Volume 70(3)
Pages 2096-2102
Published 2020-3-1
DOI 10.1099/ijsem.0.004022
PMID 31999242
MeSH Arctic Regions Bacterial Typing Techniques Base Composition DNA, Bacterial / genetics Fatty Acids / chemistry Phaeophyceae / microbiology* Phospholipids / chemistry Phylogeny RNA, Ribosomal, 16S / genetics Sequence Analysis, DNA Shewanella / classification* Shewanella / isolation & purification Svalbard Ubiquinone / chemistry Vitamin K 2 / analogs & derivatives Vitamin K 2 / chemistry
Resource
General Microbes JCM32306