論文 - 詳細
| RRC ID | 71062 |
|---|---|
| 著者 | Kim J, Jung HS, Baek JH, Chun BH, Khan SA, Jeon CO. |
| タイトル | Paenibacillus silvestris sp. nov., Isolated from Forest Soil. |
| ジャーナル | Curr Microbiol |
| Abstract |
A bacterial strain, designated 5J-6T, was isolated from soil in Cheongnyeongpo, Republic of Korea. Cells were Gram-stain-positive, strictly aerobic, and motile rods and their catalase and oxidase activities were positive. Strain 5J-6T grew at 10-30 °C, pH 6.0-9.0, and 0-0.8% (w/v) NaCl concentration, with optimum growth at 25 °C, pH 6.5, and 0.4% NaCl concentration. Anteiso-C15:0 and iso-C16:0 were detected as the predominant fatty acids and menaquinone-7 was the sole isoprenoid quinone detected. Strain 5J-6T contained phosphatidylethanolamine, phosphatidylglycerol and an unidentified phospholipid as major polar lipids. The peptidoglycan belonged to the type A1γ meso-diaminopimelic acid. The G+C content of the genomic DNA calculated from the whole genomic sequence was 46.1 mol%. Phylogenetic analysis of strain 5J-6T based on 16S rRNA gene sequences placed the isolate into a member of the genus Paenibacillus. Sequence similarity analysis of 16S rRNA gene sequences revealed that strain 5J-6T was most closely related to Paenibacillus aceris KUDC4121T and Paenibacillus chondroitinus DSM 5051T with 98.76% and 98.42% similarities, respectively. Average nucleotide identity and in silico DNA-DNA hybridization values between strain 5J-6T and the type strain of P. aceris were 83.97% and 28.60%, respectively. Based on the phylogenetic and phenotypic characteristics and genomic data, strain 5J-6T could be considered to represent a novel species of the genus Paenibacillus, for which the name Paenibacillus silvestris sp. nov. is proposed. The type strain is 5J-6T (= KACC 21430T = JCM 33812T). |
| 巻・号 | 78(2) |
| ページ | 822-829 |
| 公開日 | 2021-2-1 |
| DOI | 10.1007/s00284-020-02333-4 |
| PII | 10.1007/s00284-020-02333-4 |
| PMID | 33388935 |
| MeSH | Bacterial Typing Techniques DNA, Bacterial / genetics Fatty Acids / analysis Forests Paenibacillus* / genetics Phylogeny RNA, Ribosomal, 16S / genetics Republic of Korea Sequence Analysis, DNA Soil* Vitamin K 2 / analysis |
| オルトメトリクス指標 |
オルトメトリクス指標項目
|
| 最多言及媒体 | X(Twitter) |
| 各媒体での言及数の合計 | 1 |
| 過去6か月間でのオルトメトリクス指標の変動値 | 0.0 |
| リソース情報 | |
| 一般微生物 | JCM33812 |