RRC ID 7119
Author Kimoto KI, Aizawa T, Urai M, Bao Ve N, Suzuki KI, Nakajima M, Sunairi M.
Title Acidocella aluminiidurans sp. nov., an aluminium-tolerant bacterium isolated from Panicum repens grown in a highly acidic swamp in actual acid sulfate soil area of Vietnam.
Journal Int J Syst Evol Microbiol
Abstract An aluminium-tolerant bacterium, strain AL46(T), was isolated from a waterweed, Panicum repens, grown in a highly acidic swamp (pH 3) at an actual acid sulfate soil area of Vietnam. Cells were Gram-negative, aerobic, non-spore-forming, non-motile rods (0.3 microm wide and 1.2-1.6 microm long). 16S rRNA gene sequence analysis indicated that strain AL46(T) belongs to the genus Acidocella, class Alphaproteobacteria. Strain AL46(T) was related most closely to the type strains of Acidocella facilis and Acidocella aminolytica (99.4 and 97.8 % 16S rRNA gene sequence similarity, respectively). Levels of DNA-DNA relatedness between strain AL46(T) and the above type strains were 40 %. The results of physiological and biochemical tests allowed the novel strain to be differentiated phenotypically from the two recognized Acidocella species. Data for predominant cellular fatty acids (cyclopropyl C(19 : 0) and C(18 : 1)), major isoprenoid quinone (Q-10) and DNA G+C content (65.6 mol%) were in accordance with those reported for the genus Acidocella. Therefore, strain AL46(T) is considered to represent a novel species of the genus Acidocella, for which the name Acidocella aluminiidurans sp. nov. is proposed. The type strain is AL46(T) (=NBRC 104303(T) =VTCC-D9-1(T)).
Volume 60(Pt 4)
Pages 764-768
Published 2010-4-1
DOI 10.1099/ijs.0.011569-0
PMID 19656936
MeSH Acetobacteraceae / classification* Acetobacteraceae / drug effects Acetobacteraceae / genetics Acetobacteraceae / isolation & purification* Aluminum / pharmacology* Bacterial Typing Techniques Base Composition DNA, Ribosomal / analysis DNA, Ribosomal / genetics Fatty Acids / analysis Genes, rRNA Hydrogen-Ion Concentration Molecular Sequence Data Nucleic Acid Hybridization Panicum* / growth & development Panicum* / microbiology Phenotype Phylogeny RNA, Ribosomal, 16S / genetics Sequence Analysis, DNA Soil / analysis* Species Specificity Sulfates / analysis Vietnam Wetlands*
IF 2.415
Times Cited 18
WOS Category MICROBIOLOGY
Resource
General Microbes JCM 8796