RRC ID 73237
著者 Aguirre-Liguori JA, Morales-Cruz A, Gaut BS.
タイトル Evaluating the persistence and utility of five wild Vitis species in the context of climate change.
ジャーナル Mol Ecol
Abstract Crop wild relatives (CWRs) have the capacity to contribute novel traits to agriculture. Given climate change, these contributions may be especially vital for the persistence of perennial crops, because perennials are often clonally propagated and consequently do not evolve rapidly. By studying the landscape genomics of samples from five Vitis CWRs (V. arizonica, V. mustangensis, V. riparia, V. berlandieri and V. girdiana) in the context of projected climate change, we addressed two goals. The first was to assess the relative potential of different CWR accessions to persist in the face of climate change. By integrating species distribution models with adaptive genetic variation, additional genetic features such as genomic load and a phenotype (resistance to Pierce's Disease), we predicted that accessions from one species (V. mustangensis) are particularly well-suited to persist in future climates. The second goal was to identify which CWR accessions may contribute to bioclimatic adaptation for grapevine (V. vinifera) cultivation. To do so, we evaluated whether CWR accessions have the allelic capacity to persist if moved to locations where grapevines are cultivated in the United States. We identified six candidates from V. mustangensis and hypothesized that they may prove useful for contributing alleles that can mitigate climate impacts on viticulture. By identifying candidate germplasm, this study takes a conceptual step toward assessing the genomic and bioclimatic characteristics of CWRs.
巻・号 31(24)
ページ 6457-6472
公開日 2022-10-5
DOI 10.1111/mec.16715
PMID 36197804
PMC PMC10092629
MeSH Climate Change Crops, Agricultural / genetics Genomics Phenotype Vitis* / genetics
IF 5.163
リソース情報
GBIF Plant specimens of Ishikawa Museum of Natural History Long-term fauna and flora records of the experimental forests of the Forest Research Station of Hokkaido University, Japan Plant specimens of Toyota City Nature Sanctuary Plant specimens of Tochigi Prefectural Museum Plant specimens of Nasunogahara Museum Plant Specimen Database of Tama Forest Science Garden, Forestry and Forest Products Research Institute, Japan Plant specimens of Otaru Museum Plant specimens of Komatsu City Museum Plant specimens of Horaiji-san Museum of Natural History Toji K. collection The 6-7th National Survey on the Natural Environment: Vegetation Survey Vascular Plant Specimens of Yamagata Prefectural Museum Vascular plant specimens of Omachi Alpine Museum Plant Specimens collections of the Kyushu University Museum Vascular plant specimens of Akita Prefectural Museum Vascular plants database of Atsugi City Museum Herbarium, University Archives and Collections, Fukushima University, Japan (FKSE) Angiospermatatophytina Collection of Saitama Museum of Natural History Vascular plant specimens of Iida City Museum Plant specimens of Oiso Municipal Museum Herbarium of Hokkaido University Museum (SAPS) Vascular Plant Collection of Natural History Museum and Institute, Chiba Herbarium Specimens of Museum of Nature and Human Activities, Hyogo Pref., Japan Spermatophyta collection of Museum of Natural and Environmental History, Shizuoka Ibaraki Nature Museum, Vascular Plants collection Vascular plant specimens of National Museum of Nature and Science (TNS) Plant Specimens of Kurashiki Museum of Natural History Herbarium Specimens of Tokushima Prefectural Museum, Japan Herbarium of Kitakyushu Museum of Natural History and Human History Plant Specimens of Lake Biwa Museum Spermatophyta specimens of Iwate Prefectural Museum Vascular Plants Collection of Sagamihara City Museum Plant specimens in the Museum of Nature and Human Activities, Hyogo Prefecture, Japan Plant specimens deposited in Osaka Museum of Natural History, Japan Vascular Plant Specimens of Kochi Prefectural Makino Botanical Garden Plant Specimens of The Shimane Nature Museum of Mt. Sanbe Vascular Plant Specimen database of Kanagawa Prefectural Museum of Natural History Gunma Museum of Natural History, Vascular Plant Specimen Vascular plants collection of Hiratsuka City Museum Plant specimens of Kushiro City Museum Monitoring records of plant species in the Hakone region of Fuji-Hakone-Izu National Park, Japan, 2001-2010 Plant specimens of Horaiji-san Museum of Natural History Kichi T. collection Spermatophytes collection of Okinawa Prefectural Museum & Art Museum Fossil Specimens of Komatsu City Museum Herbarium Specimens of Bonin and Ryukyu Islands Vascular plant specimens of Sugadaira Research Station, Mountain Science Center, University of Tsukuba Herbarium of Shinshu University Plant specimens of Parthenon Tama Museum (PTHM) Plant specimens of Obihiro Centennial City Museum Botanical Specimens of Kaizuka City Museum of Natural History (KCMN) Tracheophyta collection of Biodiversity Center of Japan, Ministry of the Environment Vascular plant specimens of The Shirakami Research Center for Environmental Sciences, Hirosaki University Vascular plant specimens of Aomori City Forestry Museum Asahikawa Educational College herbarium Plant specimens of the Museum of Yamagata University Plant specimens of Toyota City Nature Sanctuary (from non-museum circle) Vascular plant specimens of Toyama Science Museum Plant specimens of Takatsuki Nature Museum (Aquapia Akutagawa) The 2-5th National Survey on the Natural Environment: Vegetation Survey