RRC ID 75442
著者 Lee ZY, Ng ZY, Mohd Nor MN, Teo WFA, Tan GYA.
タイトル Streptomyces solincola sp. nov., isolated from soil in Malaysia.
ジャーナル Int J Syst Evol Microbiol
Abstract A urease-producing Gram-stain-positive actinobacterium, designated strain T5T, was isolated from a soil sample collected at a highway hillslope in Selangor, Malaysia. The strain was found to produce pale yellowish-pink aerial mycelia with smooth long chain spores and extensively branched light yellowish-pink substrate mycelia on oatmeal agar. Strain T5T grew at 15-37 °C, pH 6-11, and tolerated up to 9 % (w/v) NaCl, with optimal growth occurring at 28 °C, pH 6-9 and without NaCl. The whole-cell sugar hydrolysate of strain T5T contained galactose, glucose and ribose. The ll-diaminopimelic acid isomer was detected in the cell wall. Diphosphatidylglycerol, phosphatidylcholine, phosphatidylethanolamine, phosphatidylglycerol and phosphatidylinositol were found to be the predominant polar lipids. The main fatty acids were anteiso-C17 : 0, iso-C16 : 0, anteiso-C15 : 0 and iso-C14 : 0. Comparative analysis of the 16S rRNA gene sequences indicated that strain T5T belonged to Streptomyces of the family Streptomycetaceae with the highest 16S rRNA gene sequence similarity to Streptomyces lichenis LCR6-01T (99.0 %). The overall genome relatedness indices revealed that the closest related species was S. lichenis LCR6-01T with 89.4 % average nucleotide identity and 33.7 % digital DNA-DNA hybridization. Phylogeny analyses showed that strain T5T was closely related to Streptomyces fradiae, Streptomyces lavendofoliae, Streptomyces lichenis, Streptomyces roseolilacinus and Streptomyces somaliensis. Based on these polyphasic data, strain T5T represents a novel species, for which the name Streptomyces solincola sp. nov. is proposed. The type strain is T5T (=TBRC 5137T= DSM 42166T).
巻・号 72(10)
公開日 2022-10-1
DOI 10.1099/ijsem.0.005594
PMID 36282570
MeSH Agar Bacterial Typing Techniques Base Composition Cardiolipins DNA, Bacterial / genetics Diaminopimelic Acid / analysis Fatty Acids / chemistry Galactose Glucose Malaysia Nucleotides Phosphatidylcholines Phosphatidylethanolamines* Phosphatidylinositols / analysis Phospholipids / analysis Phylogeny RNA, Ribosomal, 16S / genetics Ribose Sequence Analysis, DNA Sodium Chloride Soil Streptomyces* Urease / genetics
リソース情報
一般微生物 JCM 4344 JCM 4479