RRC ID 75509
Author Huang Y, Dong L, Gong J, Yang J, Lu S, Lai XH, Jin D, Huang Q, Pu J, Liu L, Xu J.
Title Phenotypic and genomic characteristics of Brevibacterium zhoupengii sp. nov., a novel halotolerant actinomycete isolated from bat feces.
Journal J Microbiol
Abstract Two strictly aerobic, Gram-staining-positive, non-spore-forming, regular rod-shaped (approximately 0.7 × 1.9 mm) bacteria (HY170T and HY001) were isolated from bat feces collected from Chongzuo city, Guangxi province (22°20'54″N, 106°49'20″E, July 2011) and Chuxiong Yi Autonomous Prefecture, Yunnan province (25°09'10″N, 102°04'39″E, October 2013) of South China, respectively. Optimal growth is obtained at 25-28°C (range, 4-32°C) on BHI-5% sheep blood plate with pH 7.5 (range, 5.0-10.0) in the presence of 0.5-1.0% NaCl (w/v) (range, 0-15% NaCl [w/v]). The phylogenetic and phylogenomic trees based respectively on the 16S rRNA gene and 845 core gene sequences revealed that the two strains formed a distinct lineage within the genus Brevibacterium, most closely related to B. aurantiacum NCDO 739T (16S rRNA similarity, both 98.5%; dDDH, 46.7-46.8%; ANI, 91.9-92.1%). Strain HY170T contained MK-8(H2), diphosphatidylglycerol (DPG) and phosphatidylglycerol (PG), galactose and ribose as the predominant menaquinone, major polar lipids, and main sugars in the cell wall teichoic acids, respectively. The meso-diaminopimelic acid (meso-DAP) was the diagnostic diamino acid of the peptidoglycan found in strain HY170T. Anteiso-C15:0 and anteiso-C17:0 were the major fatty acids (> 10%) of strains HY170T and HY001, with anteiso-C17:1A predominant in strain HY170T but absent in strain HY001. Mining the genomes revealed the presence of secondary metabolite biosynthesis gene clusters encoding for non-alpha poly-amino acids (NAPAA), ectoine, siderophore, and terpene. Based on results from the phylogenetic, chemotaxonomic and phenotypic analyses, the two strains could be classified as a novel species of the genus Brevibacterium, for which the name Brevibacterium zhoupengii sp. nov. is proposed (type strain HY170T = CGMCC 1.18600T = JCM 34230T).
Volume 60(10)
Pages 977-985
Published 2022-10-1
DOI 10.1007/s12275-022-2134-8
PII 10.1007/s12275-022-2134-8
PMID 35984616
PMC PMC9390107
MeSH Actinobacteria* / genetics Animals Bacterial Typing Techniques Base Composition Brevibacterium* Cardiolipins / analysis China Chiroptera* DNA, Bacterial / genetics Diaminopimelic Acid / analysis Fatty Acids / analysis Feces / chemistry Galactose Genomics Peptidoglycan / chemistry Phospholipids / analysis Phylogeny RNA, Ribosomal, 16S / genetics Ribose Sequence Analysis, DNA Sheep Siderophores Sodium Chloride / analysis Teichoic Acids Vitamin K 2 / analysis
Resource
General Microbes JCM 34230 JCM 2590 JCM 13317 JCM 13521