RRC ID 80176
著者 Cheng Y, Zhu W, Han S, Yang J, Wu G, Zhao G, He X.
タイトル Roseomonas populi sp. nov., an acetate-degrading bacteria isolated from the stem of Populus tomentosa.
ジャーナル Antonie Van Leeuwenhoek
Abstract Strain CN29T, isolated from the stem of 5- to 6-year-old Populus tomentosa in Shandong, China, was characterized using a polyphasic taxonomic approach. Cells of CN29T were Gram-stain negative, aerobic, nonspore-forming, and nonmotile coccoid. Growth occurred at 20-37 °C, pH 4.0-9.0 (optimum, pH 6.0), and with 0-1% NaCl (optimum, 1%). Phylogenetic analysis based on the 16S rRNA gene sequence indicated that strain CN29T was closely related to members of the genus Roseomonas and closest to Roseomonas pecuniae N75T (96.6%). This classification was further supported by phylogenetic analysis using additional core genes. The average nucleotide identity and digital DNA‒DNA hybridization values between strain CN29T and Roseomonas populi CN29T were 82.7% and 27.8%, respectively. The genome size of strain CN29T was 5.87 Mb, with a G + C content of 70.9%. The major cellular fatty acids included summed feature 8 (C18:1 ω7c/C18:1 ω6c), C19:0 cyclo ω8c and C16:0. The major respiratory quinone was Q-10. The polar lipids were phosphatidylcholine, aminolipid, phosphatidylglycerol, and diphosphatidylglycerol. Strain CN29T can utilize acetate as a carbon source for growth and metabolism. Additionally, it contains acid phosphatase (2-naphthyl phosphate), which catalyzes the hydrolysis of phosphoric monoesters. The CN29T strain contains several genes, including maeB, gdhB, and cysJ, involved in carbon, nitrogen, and sulfur cycling. These findings suggest that the strain may actively participate in ecosystem cycling, leading to soil improvement and promoting the growth of poplar trees. Based on the phylogenetic, phenotypic, and genotypic characteristics, strain CN29T is concluded to represent a novel species of the genus Roseomonas, for which the name Roseomonas populi sp. nov. is proposed. The type strain is CN29T (= JCM 35579T = GDMCC 1.3267T).
巻・号 117(1)
ページ 2
公開日 2023-12-26
DOI 10.1007/s10482-023-01911-3
PII 10.1007/s10482-023-01911-3
PMID 38147266
MeSH Acetates / metabolism Bacterial Typing Techniques China DNA, Bacterial / genetics Methylobacteriaceae* / classification Methylobacteriaceae* / isolation & purification Nucleic Acid Hybridization Phylogeny* Plant Stems / microbiology Populus* / microbiology RNA, Ribosomal, 16S / genetics
リソース情報
一般微生物 JCM 35579